RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 VTCN1Q7Z7D3 282 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF605Q86T29 641 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 GLCCI1Q86VQ1 547 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 C9orf43Q8TAL5 461 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 AP2M1Q96CW1 435 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 SLC25A51Q9H1U9 297 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 MIXL1Q9H2W2 232 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 ABCB9Q9NP78 766 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 PAK6Q9NQU5 681 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 MED16Q9Y2X0 877 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 PDCD11Q14690 1871 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 IQCMA0A1B0GVH7 501 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 FABP12A6NFH5 140 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 PCP4L1A6NKN8 68 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 MYL12BO14950 172 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 LDB2O43679 373 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 RFPL3O75679 317 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 IGHA2P01877 340 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 MYL12AP19105 171 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 PXNP49023 591 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 HK3P52790 923 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 RRAS2P62070 204 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 CDC42EP1Q00587 391 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 GARNL3Q5VVW2 1013 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 NADSYN1Q6IA69 706 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 ARSKQ6UWY0 536 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 CLEC20AQ6ZU45 233 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF551Q7Z340 670 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 KRTCAP2Q8N6L1 136 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 GPR150Q8NGU9 434 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 SENP8Q96LD8 212 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 CDCA4Q9BXL8 241 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 DPY30Q9C005 99 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 EXOSC4Q9NPD3 245 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 CRTAC1Q9NQ79 661 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 CCL27Q9Y4X3 112 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 SCAMP3O14828 347 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 PROM1O43490 865 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 C9P02748 559 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 HMGCLP35914 325 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 RPL38P63173 70 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 RUNX1T1Q06455 604 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 KCNC3Q14003 757 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 IHHQ14623 411 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 ABRAXAS2Q15018 415 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 LARS2Q15031 903 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 AANATQ16613 207 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 HKDC1Q2TB90 917 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 MRNIPQ6NTE8 343 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 HDDC2Q7Z4H3 204 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 FAM124AQ86V42 546 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 FERD3LQ96RJ6 166 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 PPIL3Q9H2H8 161 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 AGO3Q9H9G7 860 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF224Q9NZL3 707 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 FAM50BQ9Y247 325 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 BTN3A1O00481 513 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 WNT9AO14904 365 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 EVI2BP34910 448 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 ABHD18Q0P651 414 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 SMARCB1Q12824 385 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 PTPRCAPQ14761 206 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 PGBD3Q8N328 593 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 DUSP18Q8NEJ0 188 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 B3GNT7Q8NFL0 401 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 EDEM1Q92611 657 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 TESCQ96BS2 214 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 IMP4Q96G21 291 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 ZC3HAV1LQ96H79 300 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 TNIP3Q96KP6 325 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 QRFPRQ96P65 431 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 CLMPQ9H6B4 373 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 MAPRE3Q9UPY8 281 aa14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 CFAP20Q9Y6A4 193 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-201ENST00000389386 TRAV19A0A0A6YYK7 116 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 F8W810 466 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 SERPINI2O75830 405 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 POMCP01189 267 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 USP17L7P0C7H9 530 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 MAP2K3P46734 347 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ITGA1P56199 1179 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 PCDH1Q08174 1060 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 COL19A1Q14993 1142 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ANGPT1Q15389 498 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 TYW3Q6IPR3 259 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 GALNT10Q86SR1 603 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 COMMD7Q86VX2 200 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 GPALPP1Q8IXQ4 340 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ZZZ3Q8IYH5 903 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF366Q8N895 744 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 DENND6BQ8NEG7 585 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 LPCAT1Q8NF37 534 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 PPP3R2Q96LZ3 170 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF578Q96N58 590 aaPredicted RBP14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 CATSPERBQ9H7T0 1116 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 HHATLQ9HCP6 504 aa14.15□□□□□ -0.14
VPS9D1-201ENST00000389386 TMLHEQ9NVH6 421 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms