RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SLC24A5Q71RS6 500 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 MARCH9Q86YJ5 346 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 TIGD4Q8IY51 512 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CHIAQ9BZP6 476 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 ABCB8Q9NUT2 735 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 EIF3KQ9UBQ5 218 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 RREB1Q92766 1687 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 PTGS2P35354 604 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 MTAPQ13126 283 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 UPP1Q16831 310 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 AGMOQ6ZNB7 445 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 TBX5Q99593 518 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 BOCQ9BWV1 1114 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 UCK2Q9BZX2 261 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 TAS2R7Q9NYW3 318 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 ABCG2Q9UNQ0 655 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC35F4A4IF30 521 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC38A8A6NNN8 435 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CTDSP2O14595 271 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 C6orf47O95873 294 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 ADRA1AP35348 466 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF697Q5TEC3 545 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 STEAP3Q658P3 488 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 RASSF6Q6ZTQ3 369 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CFAP206Q8IYR0 622 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CD200R1Q8TD46 325 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 GTF2H4Q92759 462 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 SIPA1Q96FS4 1042 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 BCL7BQ9BQE9 202 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 GORASP2Q9H8Y8 452 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLCA1A8K7I4 914 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 ISM1B1AKI9 464 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CH25HO95992 272 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 BCHEP06276 602 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 IL7P13232 177 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 GPR1P46091 355 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLDN8P56748 225 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 OXA1LQ15070 435 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 UGT8Q16880 541 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 SNAP47Q5SQN1 464 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 LRRC70Q7Z2Q7 622 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 DTX3Q8N9I9 347 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 PIGKQ92643 395 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 MND1Q9BWT6 205 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
TRAPPC9-201ENST00000389328 NUP205Q92621 2012 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 A0A0G2JN53 185 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM155AB1AL88 458 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 TCF3P15923 654 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 RYKP34925 604 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 SSR2P43308 183 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLK3P49761 638 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 NDUFAF6Q330K2 333 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF792Q3KQV3 632 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 GPR33Q49SQ1 333 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 C22orf42Q6IC83 251 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 SMARCD3Q6STE5 483 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 METTL4Q8N3J2 472 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 PARP16Q8N5Y8 322 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 DOHHQ9BU89 302 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 SEC14L4Q9UDX3 406 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 CPSF4LA6NMK7 179 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR2B3O76000 313 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 C9orf64Q5T6V5 341 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 ARL14EPQ8N8R7 260 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM46DQ8NEK8 389 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 TMEM80Q96HE8 168 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 UHRF1Q96T88 793 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 CFAP97Q9P2B7 532 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 TRPS1Q9UHF7 1281 aa12.71□□□□□ -0.37
TRAPPC9-201ENST00000389328 ARNTLO00327 626 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 KHDRBS3O75525 346 aaKnown RBP12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCDH8O95206 1070 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 FGBP02675 491 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 SPHARQ15513 63 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 FAM214AQ32MH5 1076 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 BCL7AQ4VC05 210 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 KLHL22Q53GT1 634 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 ADGRF1Q5T601 910 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 LRRC66Q68CR7 880 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 FUT10Q6P4F1 479 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 SCD5Q86SK9 330 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms