RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CPOXP36551 454 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 KHDRBS2Q5VWX1 349 aaKnown RBP25.67■■□□□ 1.7
MSX1-201ENST00000382723 REP15Q6BDI9 236 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 KLHL35Q6PF15 583 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 FIGLAQ6QHK4 219 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 COMMD6Q7Z4G1 85 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 SLC35F3Q8IY50 421 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 TTLQ8NG68 377 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 CDC26Q8NHZ8 85 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 WDR48Q8TAF3 677 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 VPS33AQ96AX1 596 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 SPDL1Q96EA4 605 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 C11orf24Q96F05 449 aaPredicted RBP25.67■■□□□ 1.7
MSX1-201ENST00000382723 METTL2AQ96IZ6 378 aaKnown RBP25.67■■□□□ 1.7
MSX1-201ENST00000382723 EGLN2Q96KS0 407 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 FCRL4Q96PJ5 515 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 MACROD1Q9BQ69 325 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 CADM1Q9BY67 442 aaKnown RBP25.67■■□□□ 1.7
MSX1-201ENST00000382723 EFCAB1Q9HAE3 211 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 CAPN10Q9HC96 672 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 PPT2Q9UMR5 302 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 GBAP04062 536 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 PROS1P07225 676 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 NQO1P15559 274 aaKnown RBP25.66■■□□□ 1.7
MSX1-201ENST00000382723 ITGAXP20702 1163 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 JAK1P23458 1154 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 RCAN2Q14206 197 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 RABEPKQ7Z6M1 372 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 OR2I1PQ8NGU4 316 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 CREB3L4Q8TEY5 395 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 ZBTB18Q99592 522 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 C1orf21Q9H246 121 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 SYNPO2LQ9H987 977 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 TMEM131Q92545 1883 aa25.66■■□□□ 1.7
MSX1-201ENST00000382723 A0A0J9YY10 115 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 OR2A25A4D2G3 310 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 TNFSF14O43557 240 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 LRATO95237 230 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 ANXA4P09525 319 aaPredicted RBP25.65■■□□□ 1.7
MSX1-201ENST00000382723 ACPPP15309 386 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 ALDH4A1P30038 563 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 ART3Q13508 389 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 CCDC6Q16204 474 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 DEPDC1Q5TB30 811 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 FCRL6Q6DN72 434 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 GFM2Q969S9 779 aaKnown RBP25.65■■□□□ 1.7
MSX1-201ENST00000382723 SORBS1Q9BX66 1292 aaKnown RBP25.65■■□□□ 1.7
MSX1-201ENST00000382723 PCDHGA4Q9Y5G9 962 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 GNG14A0A1W2PPG7 69 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 CCDC154A6NI56 674 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 ANGPT2O15123 496 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 GSC2O15499 205 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 PCDH7O60245 1069 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 PRAMEF10O60809 474 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 CLEC3AO75596 197 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 TIA1P31483 386 aaKnown RBP eCLIP25.65■■□□□ 1.7
MSX1-201ENST00000382723 DPP6P42658 865 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 TIGD2Q4W5G0 525 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 IRGCQ6NXR0 463 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 METTL4Q8N3J2 472 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 MFSD9Q8NBP5 474 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 SARGQ9BW04 601 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 POMT2Q9UKY4 750 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 SLC6A14Q9UN76 642 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 AP1M2Q9Y6Q5 423 aa25.65■■□□□ 1.7
MSX1-201ENST00000382723 CFAP73A6NFT4 308 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 NDUFS4O43181 175 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 KRT16P08779 473 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 CAPZBP47756 277 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 RAP1GDS1P52306 607 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 CLDN8P56748 225 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 KANSL1Q7Z3B3 1105 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 SAP25Q8TEE9 199 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 MCUR1Q96AQ8 359 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 ABCG4Q9H172 646 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 SMOC1Q9H4F8 434 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 SLC52A3Q9NQ40 469 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 NDUFAF1Q9Y375 327 aa25.64■■□□□ 1.69
MSX1-201ENST00000382723 RTCAO00442 366 aaKnown RBP25.63■■□□□ 1.69
MSX1-201ENST00000382723 PLPP1O14494 284 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 MRASO14807 208 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 CTSVO60911 334 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 KLK1P06870 262 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 HNRNPH1P31943 449 aaKnown RBP25.63■■□□□ 1.69
MSX1-201ENST00000382723 AHRP35869 848 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 DGKQP52824 942 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 RPS15AP62244 130 aaKnown RBP25.63■■□□□ 1.69
MSX1-201ENST00000382723 DNAL1Q4LDG9 190 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 FBXO42Q6P3S6 717 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 RETREG3Q86VR2 466 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 DSELQ8IZU8 1212 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 UTP4Q969X6 686 aaKnown RBP25.63■■□□□ 1.69
MSX1-201ENST00000382723 ZUFSPQ96AP4 578 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 TMEM45AQ9NWC5 275 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 NLGN3Q9NZ94 848 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 GMEB2Q9UKD1 530 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 R4GN57 208 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 WDFY4Q6ZS81 3184 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 AKAP10O43572 662 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 NKAIN2Q5VXU1 208 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms