RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 SF3B4Q15427 424 aaKnown RBP eCLIP5.56□□□□□ -1.521e-7■■■□□ 16
RFC1-202ENST00000381897 STK11Q15831 433 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 MEP1AQ16819 746 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 CARD16Q5EG05 197 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 PITRM1Q5JRX3 1037 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 C9orf152Q5JTZ5 239 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 PRR5LQ6MZQ0 368 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 PRSS48Q7RTY5 328 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 PARGQ86W56 976 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ZFPM1Q8IX07 1006 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 TMEM132CQ8N3T6 1108 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 FAM109AQ8N4B1 249 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 TMEM199Q8N511 208 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 CDYL2Q8N8U2 506 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 RHOXF1Q8NHV9 184 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 C9orf43Q8TAL5 461 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 ZFP90Q8TF47 636 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 TWIST2Q8WVJ9 160 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 DNAJB3Q8WWF6 145 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 FCRL2Q96LA5 508 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 TAAR1Q96RJ0 339 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 OMDQ99983 421 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 FICDQ9BVA6 458 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 CEP41Q9BYV8 373 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 LRRN3Q9H3W5 708 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ASB7Q9H672 318 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 TBC1D17Q9HA65 648 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 TMEM45AQ9NWC5 275 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 WRAP73Q9P2S5 460 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 NUP50Q9UKX7 468 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SAMD4AQ9UPU9 718 aaKnown RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 UGT2A1Q9Y4X1 527 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 STRCP1A6NGW2 1772 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 KIAA1551Q9HCM1 1747 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 A0A096LPE4 126 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 A0A1W2PPZ6 126 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ANKRD30BLA7E2S9 258 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ABCD4O14678 606 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 HAT1O14929 419 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 EDIL3O43854 480 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 DLX3O60479 287 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 DDNO94850 711 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 EBLN1P0CF75 366 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SLC2A2P11168 524 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 ITGB5P18084 799 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ZNF10P21506 573 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 IL32P24001 234 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GRM5P41594 1212 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 MAGEA2P43356 314 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 NUMBP49757 651 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 CPT1AP50416 773 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 RPL11P62913 178 aaKnown RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 GAB1Q13480 694 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 LCLAT1Q6UWP7 414 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 BAIAP2L2Q6UXY1 529 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 RANBP10Q6VN20 620 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 FGD2Q7Z6J4 655 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 RIOX2Q8IUF8 465 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 CMTR2Q8IYT2 770 aaKnown RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 LRRC17Q8N6Y2 441 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SGCZQ96LD1 299 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 HIST1H2AAQ96QV6 131 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 DDOQ99489 341 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 RSRP1Q9BUV0 290 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SPATA5L1Q9BVQ7 753 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SEMA4CQ9C0C4 833 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 CLMPQ9H6B4 373 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ATP13A3Q9H7F0 1226 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 MRM3Q9HC36 420 aaKnown RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 GFOD1Q9NXC2 390 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 POU2F3Q9UKI9 436 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 IKZF3Q9UKT9 509 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 COPS3Q9UNS2 423 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 UBA6A0AVT1 1052 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 TMEM82A0PJX8 343 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 AGAP5A6NIR3 686 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SULT1C2O00338 296 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GABRDO14764 452 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GRID2O43424 1007 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 DNPH1O43598 174 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SNAPC5O75971 98 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 LRIG2O94898 1065 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 EPORP19235 508 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 UGT2B10P36537 528 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 NUDT1P36639 197 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 ACTR1AP61163 376 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GBE1Q04446 702 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GRIK2Q13002 908 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SMCO1Q147U7 214 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 NCF4Q15080 339 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 FNDC3BQ53EP0 1204 aaKnown RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 LCN1P1Q5VSP4 162 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GTF2IRD2BQ6EKJ0 949 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 GTF2IRD2Q86UP8 949 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 PTGR2Q8N8N7 351 aaPredicted RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 RTL3Q8N8U3 475 aaKnown RBP5.56□□□□□ -1.52
RFC1-202ENST00000381897 MAPK15Q8TD08 544 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 SOCS4Q8WXH5 440 aa5.56□□□□□ -1.52
RFC1-202ENST00000381897 BIRC7Q96CA5 298 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms