RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 DNAJB8Q8NHS0 232 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 FAM45AQ8TCE6 357 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 SLC13A3Q8WWT9 602 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 TM4SF19Q96DZ7 209 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 LINGO1Q96FE5 620 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 CYTH2Q99418 400 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 NDNQ99608 321 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 VN1R1Q9GZP7 353 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPAIN-202ENST00000381208 SYNPO2LQ9H987 977 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 CLK4Q9HAZ1 481 aaKnown RBP12.29□□□□□ -0.44
RPAIN-202ENST00000381208 ABI3Q9P2A4 366 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 A1L4Q6 167 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 AHSGP02765 367 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 RNF224P0DH78 156 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 MAT1AQ00266 395 aaKnown RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 EXT1Q16394 746 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 KCTD19Q17RG1 926 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 BBS9Q3SYG4 887 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 PLAG1Q6DJT9 500 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 FAAH2Q6GMR7 532 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 SLC34A3Q8N130 599 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 SIRT6Q8N6T7 355 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 MFSD9Q8NBP5 474 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 CATSPER1Q8NEC5 780 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 OR9A4Q8NGU2 314 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 OR56A3Q8NH54 315 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 ANKRD7Q92527 254 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 NR4A3Q92570 626 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 PDLIM5Q96HC4 596 aaKnown RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 ZNF354BQ96LW1 612 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 MAGEB10Q96LZ2 347 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 OR1F2PQ96R84 312 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 DDX47Q9H0S4 455 aaKnown RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 ATG10Q9H0Y0 220 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
RPAIN-202ENST00000381208 ARL15Q9NXU5 204 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 PCDHGB6Q9Y5F9 930 aa12.28□□□□□ -0.44
RPAIN-202ENST00000381208 OR5H15A6NDH6 313 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 FFAR3O14843 346 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 GPR42O15529 346 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 JRKO75564 520 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 F7P08709 466 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-202ENST00000381208 STSP08842 583 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 NPPBP16860 134 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 GABRB3P28472 473 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 XCR1P46094 333 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 TIAL1Q01085 375 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■■■□ 23
RPAIN-202ENST00000381208 MEF2AQ02078 507 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-202ENST00000381208 PWP1Q13610 501 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 SYT16Q17RD7 645 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 TEDDM1Q5T9Z0 273 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 MFSD4BQ5TF39 518 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 ZNF324BQ6AW86 544 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-202ENST00000381208 HIBCHQ6NVY1 386 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-202ENST00000381208 ZGRF1Q86YA3 2104 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 PLPP5Q8NEB5 264 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 OR4K1Q8NGD4 311 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 FBXL8Q96CD0 374 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 STMN3Q9NZ72 180 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 ADAMTS6Q9UKP5 1117 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 OSGIN2Q9Y236 505 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 CREBBPQ92793 2442 aa12.27□□□□□ -0.45
RPAIN-202ENST00000381208 TRBC2A0A5B9 178 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 URADA6NGE7 173 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 LRRTM2O43300 516 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 PRAMEF2O60811 474 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 RASAL1O95294 804 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 MLYCDO95822 493 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 TSPAN12O95859 305 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 WDPCPO95876 746 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 ITGAMP11215 1152 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 CDH1P12830 882 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 IL1RNP18510 177 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 JAK1P23458 1154 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 CDKN2DP55273 166 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 ARL4CP56559 192 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 RGS1Q08116 209 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 CSHL1Q14406 222 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 BTBD16Q32M84 506 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 RBM20Q5T481 1227 aaKnown RBP12.26□□□□□ -0.45
RPAIN-202ENST00000381208 HECTD2Q5U5R9 776 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 SLC26A11Q86WA9 606 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 M1APQ8TC57 530 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 ALKBH8Q96BT7 664 aaKnown RBP12.26□□□□□ -0.45
RPAIN-202ENST00000381208 SNF8Q96H20 258 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 LPAR4Q99677 370 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 MESP1Q9BRJ9 268 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 NSMCE4AQ9NXX6 385 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 PLA2G3Q9NZ20 509 aa12.26□□□□□ -0.45
RPAIN-202ENST00000381208 TEX15Q9BXT5 2789 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 MAGEB17A8MXT2 336 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ESPNB1AK53 854 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 CCDC188H7C350 402 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 SGK494L7N484 410 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms