RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TSPYL5Q86VY4 417 aaPredicted RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SYT12Q8IV01 421 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 RHOXF1Q8NHV9 184 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SH3KBP1Q96B97 665 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 P2RY13Q9BPV8 354 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 HTATIP2Q9BUP3 242 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 REEP1Q9H902 201 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 RNF6Q9Y252 685 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 GPC6Q9Y625 555 aaPredicted RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SCN8AQ9UQD0 1980 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 OLFM2O95897 454 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ADH1AP07327 375 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CTSAP10619 480 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 LAMP1P11279 417 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 PABPC1P11940 636 aaKnown RBP15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ACPPP15309 386 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CYP4F2P78329 520 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CYP27C1Q4G0S4 372 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 GALNT13Q8IUC8 556 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC7A5P1Q8MH63 180 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 OR52J3Q8NH60 311 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CFHR5Q9BXR6 569 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 RLIMQ9NVW2 624 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SNX6Q9UNH7 406 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 LOC100506127A0A0U1RQW1 187 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 MAGEB17A8MXT2 336 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SCN2BO60939 215 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 PRPS2P11908 318 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 COX7A2P14406 83 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CD22P20273 847 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 AOAHP28039 575 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ETV3P41162 512 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CXCR4P61073 352 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 DUOXA1Q1HG43 343 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 CCDC103Q8IW40 242 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ELMO1Q92556 727 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SCRN2Q96FV2 425 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SIGLEC11Q96RL6 698 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 COPS4Q9BT78 406 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ZBP1Q9H171 429 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 RDH14Q9HBH5 336 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 TAS2R16Q9NYV7 291 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC6A14Q9UN76 642 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 TESMINQ9Y4I5 508 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 EPN2O95208 641 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 HIST1H2AGP0C0S8 130 aaPredicted RBP15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 HIST1H2ADP20671 130 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 RRM2P31350 389 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 NSG1P42857 185 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 PROX2Q3B8N5 592 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 IQCCQ4KMZ1 466 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 STEAP3Q658P3 488 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 RNF165Q6ZSG1 346 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 LYSMD2Q8IV50 215 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 SVOPQ8N4V2 548 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 LILRA3Q8N6C8 439 aaPredicted RBP15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 Q8N9G6 341 aaPredicted RBP15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 HIST1H2AHQ96KK5 128 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ZSWIM3Q96MP5 696 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 HIST1H2AJQ99878 128 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 H2AFJQ9BTM1 129 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ZDHHC3Q9NYG2 299 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 ITM2BQ9Y287 266 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 AP3M1Q9Y2T2 418 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 TSC22D4Q9Y3Q8 395 aa15.69■□□□□ 0.1
NKX3-1-201ENST00000380871 AIREO43918 545 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 FRG2Q64ET8 278 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 FAM124AQ86V42 546 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 CHCHD4Q8N4Q1 142 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 CMTM7Q96FZ5 175 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 FRG2BQ96QU4 278 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 SIAEQ9HAT2 523 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 RAD18Q9NS91 495 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 ANAPC1Q9H1A4 1944 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 MICAL3Q7RTP6 2002 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 OXSR1O95747 527 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 DNTTP04053 509 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 C1SP09871 688 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 ALOX5P09917 674 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 CTNNB1P35222 781 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 FAHD1Q6P587 224 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 HSD11B1LQ7Z5J1 315 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 GRASPQ7Z6J2 395 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 TSEN54Q7Z6J9 526 aaKnown RBP15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 TOX2Q96NM4 488 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 BCL7BQ9BQE9 202 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 WRAP53Q9BUR4 548 aaKnown RBP15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 ITPAQ9BY32 194 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 QPCTLQ9NXS2 382 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 KCTD5Q9NXV2 234 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 GPR83Q9NYM4 423 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 ZNF232Q9UNY5 417 aa15.68■□□□□ 0.1
NKX3-1-201ENST00000380871 PLK4O00444 970 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 SOCS5O75159 536 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 LEFTY1O75610 366 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 ABCB1P08183 1280 aaPredicted RBP15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 OR56A5P0C7T3 313 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 OR1E2P47887 323 aa15.67■□□□□ 0.1
NKX3-1-201ENST00000380871 PPP5CP53041 499 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms