RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PCDH8O95206 1070 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 APODP05090 189 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 HNRNPFP52597 415 aaKnown RBP13.75□□□□□ -0.21
CLCN4-201ENST00000380829 TAS2R38P59533 333 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 TBPL1P62380 186 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 STARD3Q14849 445 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 FAM46CQ5VWP2 391 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 ANKRD46Q86W74 232 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 WDR20Q8TBZ3 569 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 SLC6A13Q9NSD5 602 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 SLC25A37Q9NYZ2 338 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 PSME2Q9UL46 239 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 PPT2Q9UMR5 302 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 TCRBV5S2A0A599 114 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 NOTOA8MTQ0 251 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 AXIN1O15169 862 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 UGDHO60701 494 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 CPNE6O95741 557 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 LAMP2P13473 410 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 PRPH2P23942 346 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 HTR1EP28566 365 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 TMBIM6P55061 237 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 CLDN8P56748 225 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
CLCN4-201ENST00000380829 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLCN4-201ENST00000380829 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 CST6Q15828 149 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 ITPRIPL2Q3MIP1 535 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 AGBL4Q5VU57 503 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 TMEM184AQ6ZMB5 413 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 PRR23BQ6ZRT6 265 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 TMPRSS11BQ86T26 416 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 NEIL2Q969S2 332 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 THUMPD3Q9BV44 507 aaKnown RBP13.75□□□□□ -0.21
CLCN4-201ENST00000380829 LGR4Q9BXB1 951 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 SGK2Q9HBY8 427 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 SH2B3Q9UQQ2 575 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 IFT52Q9Y366 437 aa13.75□□□□□ -0.21
CLCN4-201ENST00000380829 A0A1W2PP55 124 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 MT-ND1P03886 318 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 PRPS2P11908 318 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 PCNAP12004 261 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 IL10P22301 178 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 TIE1P35590 1138 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 NDUFA5Q16718 116 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 ATAD3BQ5T9A4 648 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 GRHL2Q6ISB3 625 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 NOXRED1Q6NXP6 359 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 PNCKQ6P2M8 343 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 C11orf96Q7Z7L8 435 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 DTWD1Q8N5C7 304 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 CDC26Q8NHZ8 85 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 RAB7BQ96AH8 199 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 TP63Q9H3D4 680 aaPredicted RBP13.74□□□□□ -0.21
CLCN4-201ENST00000380829 MUC13Q9H3R2 512 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 TNFRSF10AO00220 468 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 KRT75O95678 551 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 SNAP29O95721 258 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 GSNP06396 782 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 S100A3P33764 101 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
CLCN4-201ENST00000380829 MAPK9P45984 424 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 XAF1Q6GPH4 301 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 GLYATQ6IB77 296 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 OR8J3Q8NGG0 315 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 OR2L2Q8NH16 312 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 OR10A6Q8NH74 314 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 ELSPBP1Q96BH3 223 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 AURKBQ96GD4 344 aaPredicted RBP13.74□□□□□ -0.21
CLCN4-201ENST00000380829 ZNF514Q96K75 400 aaPredicted RBP13.74□□□□□ -0.21
CLCN4-201ENST00000380829 MAGEB10Q96LZ2 347 aaPredicted RBP13.74□□□□□ -0.21
CLCN4-201ENST00000380829 ZNF583Q96ND8 569 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
CLCN4-201ENST00000380829 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 VPS29Q9UBQ0 182 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 GPR34Q9UPC5 381 aa13.74□□□□□ -0.21
CLCN4-201ENST00000380829 TRPM6Q9BX84 2022 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 PRR23AA6NEV1 266 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 MAGEB17A8MXT2 336 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 SEC14L2O76054 403 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 ETHE1O95571 254 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 MAPK1P28482 360 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 CDK3Q00526 305 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 CYP4F3Q08477 520 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 CSTF3Q12996 717 aaKnown RBP13.73□□□□□ -0.21
CLCN4-201ENST00000380829 RAB30Q15771 203 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 WSCD2Q2TBF2 565 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
CLCN4-201ENST00000380829 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 CATSPEREQ5SY80 951 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 INTS11Q5TA45 600 aaKnown RBP13.73□□□□□ -0.21
CLCN4-201ENST00000380829 SLC22A16Q86VW1 577 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 GALNT13Q8IUC8 556 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 HDDC3Q8N4P3 179 aa13.73□□□□□ -0.21
CLCN4-201ENST00000380829 LILRB4Q8NHJ6 448 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms