RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 BPIFB1Q8TDL5 484 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CPNE4Q96A23 557 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ROPN1LQ96C74 230 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RHOVQ96L33 236 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 PPP3R2Q96LZ3 170 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SLC38A3Q99624 504 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SEMA4CQ9C0C4 833 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 EPHA6Q9UF33 1036 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CRYL1Q9Y2S2 319 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 DHRS7Q9Y394 339 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 PCDHB14Q9Y5E9 798 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SCAMP2O15127 329 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 PLA2G10O15496 165 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 KIAA0513O60268 411 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 HCN1O60741 890 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 NPM3O75607 178 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ANXA6P08133 673 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SAT1P21673 171 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 YWHABP31946 246 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SPRP35270 261 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 TGM4P49221 684 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CRADDP78560 199 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 TP53BP2Q13625 1128 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SMN1Q16637 294 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CDO1Q16878 200 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RGS7BPQ6MZT1 257 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 C8orf82Q6P1X6 216 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SPESP1Q6UW49 350 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 TRMT11Q7Z4G4 463 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 KIAA0907Q7Z7F0 614 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ABRAQ8N0Z2 381 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 WDR20Q8TBZ3 569 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 TMEM41AQ96HV5 264 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SLC2A13Q96QE2 648 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 TINF2Q9BSI4 451 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 GSDMCQ9BYG8 508 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 DHX35Q9H5Z1 703 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 BTNL2Q9UIR0 455 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CDH9Q9ULB4 789 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 DMRT1Q9Y5R6 373 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 TCRBV5S2A0A599 114 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 FAM221BA6H8Z2 402 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 UPK1AO00322 258 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 GPR171O14626 319 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CHADO15335 359 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 MAPK1P28482 360 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RYKP34925 604 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 GNALP38405 381 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RAB4BP61018 213 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 BEX3Q00994 111 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 MEF2AQ02078 507 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CRYZQ08257 329 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CDH18Q13634 790 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 LCN1P1Q5VSP4 162 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RAET1GQ6H3X3 334 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 DLEU7Q6UYE1 221 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 COQ8AQ8NI60 647 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 GLYATL2Q8WU03 294 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CRELD1Q96HD1 420 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RTP3Q9BQQ7 232 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ORC6Q9Y5N6 252 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 IGLV3-22A0A075B6J6 115 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 H3BM21 787 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 H7C0S8 307 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 AIPO00170 330 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 NR5A2O00482 541 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 GNGT2O14610 69 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PROM1O43490 865 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 LZTS3O60299 673 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 LILRB5O75023 590 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 GPX5O75715 221 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 FGF2P09038 288 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF37AP17032 561 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 UBA1P22314 1058 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 NOVP48745 357 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PPP1R8Q12972 351 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 RNF212Q495C1 297 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PYDC2Q56P42 97 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 FKBP1CQ5VVH2 108 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 MZT2BQ6NZ67 158 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SCYL2Q6P3W7 929 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 CLEC2AQ6UVW9 174 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SHFQ7M4L6 423 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SETD9Q8NE22 299 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 RDM1Q8NG50 284 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 UPRTQ96BW1 309 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PDLIM5Q96HC4 596 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 HOPXQ9BPY8 73 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TCEAL7Q9BRU2 100 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SOX7Q9BT81 388 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 EVA1AQ9H8M9 152 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 XPR1Q9UBH6 696 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 FBXL21Q9UKT6 434 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PRAMEF33A0A0G2JMD5 474 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 E9PI62 339 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 INMT-MINDY4F8WBC2 141 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 M0R082 166 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 DCLK1O15075 740 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms