RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ASPGQ86U10 573 aa21.78■■□□□ 1.08
U2AF1-202ENST00000380276 TMEM178AQ8NBL3 297 aa21.78■■□□□ 1.08
U2AF1-202ENST00000380276 KCT2Q8NC54 265 aa21.78■■□□□ 1.08
U2AF1-202ENST00000380276 PEX11GQ96HA9 241 aa21.78■■□□□ 1.08
U2AF1-202ENST00000380276 LPAR4Q99677 370 aa21.78■■□□□ 1.08
U2AF1-202ENST00000380276 C20orf96Q9NUD7 363 aaPredicted RBP21.78■■□□□ 1.08
U2AF1-202ENST00000380276 GABRR3A8MPY1 467 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 GOLGA6L6A8MZA4 724 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 GFYI3L273 518 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 ABOP16442 354 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 GRK3P35626 688 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 COILP38432 576 aaPredicted RBP21.77■■□□□ 1.08
U2AF1-202ENST00000380276 CD96P40200 585 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 TAS2R50P59544 299 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 CSNK1G2P78368 415 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 ABRAXAS2Q15018 415 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 NSDHLQ15738 373 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 TMEM214Q6NUQ4 689 aaKnown RBP21.77■■□□□ 1.08
U2AF1-202ENST00000380276 CYHR1Q6ZMK1 362 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 C17orf64Q86WR6 236 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 SLC5A8Q8N695 610 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 MDS2Q8NDY4 140 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 M1APQ8TC57 530 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 CD200R1Q8TD46 325 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 THAP11Q96EK4 314 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 ATG10Q9H0Y0 220 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 LZTFL1Q9NQ48 299 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 KLHL42Q9P2K6 505 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 NAALAD2Q9Y3Q0 740 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 MAD1L1Q9Y6D9 718 aa21.77■■□□□ 1.08
U2AF1-202ENST00000380276 SCN3AQ9NY46 2000 aa21.77■■□□□ 1.07
U2AF1-202ENST00000380276 FAM237BA0A1B0GVD1 139 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 MAN1A2O60476 641 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 KRT14P02533 472 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 SLC35G6P0C7Q6 338 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 CXCR5P32302 372 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 MPP1Q00013 466 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 KRTCAP3Q53RY4 240 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 H3F3CQ6NXT2 135 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 GALNTL5Q7Z4T8 443 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 CAND1Q86VP6 1230 aaKnown RBP21.76■■□□□ 1.07
U2AF1-202ENST00000380276 SLC26A11Q86WA9 606 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 SPPL2CQ8IUH8 684 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 PALM2Q8IXS6 379 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 HORMAD2Q8N7B1 307 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 SLC13A3Q8WWT9 602 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 MTFMTQ96DP5 389 aaKnown RBP21.76■■□□□ 1.07
U2AF1-202ENST00000380276 SCN2AQ99250 2005 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 PCBD2Q9H0N5 130 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 GPAMQ9HCL2 828 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 HOMER3Q9NSC5 361 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 TRMT6Q9UJA5 497 aaKnown RBP21.76■■□□□ 1.07
U2AF1-202ENST00000380276 SH2B3Q9UQQ2 575 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 MED16Q9Y2X0 877 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 PCDHGB6Q9Y5F9 930 aa21.76■■□□□ 1.07
U2AF1-202ENST00000380276 KCNE1BA0A087WTH5 132 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 SDR42E2A6NKP2 422 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 ZNHIT1O43257 154 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 CLDN14O95500 239 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 OR4D2P58180 307 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 CAPN13Q6MZZ7 669 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-202ENST00000380276 MBOAT1Q6ZNC8 495 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 NCCRP1Q6ZVX7 275 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-202ENST00000380276 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-202ENST00000380276 PDSS2Q86YH6 399 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 THAP3Q8WTV1 239 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-202ENST00000380276 TSLPQ969D9 159 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 CCDC138Q96M89 665 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 NPAS2Q99743 824 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 TRIM8Q9BZR9 551 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 CDCP1Q9H5V8 836 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 MMP25Q9NPA2 562 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 COMMD10Q9Y6G5 202 aa21.75■■□□□ 1.07
U2AF1-202ENST00000380276 TEP1Q99973 2627 aaKnown RBP21.75■■□□□ 1.07
U2AF1-202ENST00000380276 MAGEB16A2A368 324 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 C19orf84I3L1E1 186 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 NDC80O14777 642 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 SERPIND1P05546 499 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 CDH1P12830 882 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 NAE1Q13564 534 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 MAPKAPK3Q16644 382 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 AGTRAPQ6RW13 159 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 CYP4X1Q8N118 509 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 CALML6Q8TD86 181 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 SCMH1Q96GD3 660 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 FRMD6Q96NE9 622 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 LRFN1Q9P244 771 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 ADAMTS6Q9UKP5 1117 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 FBXO5Q9UKT4 447 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 MEMO1Q9Y316 297 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 APCP25054 2843 aa21.74■■□□□ 1.07
U2AF1-202ENST00000380276 ZCWPW2A0A1B0GU75 182 aa21.73■■□□□ 1.07
U2AF1-202ENST00000380276 PABPN1LA6NDY0 278 aaKnown RBP21.73■■□□□ 1.07
U2AF1-202ENST00000380276 LCMT2O60294 686 aaKnown RBP21.73■■□□□ 1.07
U2AF1-202ENST00000380276 HAUS5O94927 633 aa21.73■■□□□ 1.07
U2AF1-202ENST00000380276 SP1P08047 785 aa21.73■■□□□ 1.07
U2AF1-202ENST00000380276 AGAP20933 346 aa21.73■■□□□ 1.07
U2AF1-202ENST00000380276 CDC25BP30305 580 aa21.73■■□□□ 1.07
U2AF1-202ENST00000380276 RGS4P49798 205 aa21.73■■□□□ 1.07
U2AF1-202ENST00000380276 HSF1Q00613 529 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms