RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 H3F3CQ6NXT2 135 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 CEP128Q6ZU80 1094 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 VN1R4Q7Z5H5 301 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 REXO1L1PQ8IX06 675 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 HORMAD2Q8N7B1 307 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 M1APQ8TC57 530 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 PEX11GQ96HA9 241 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 LPAR4Q99677 370 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 EBNA1BP2Q99848 306 aaKnown RBP16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 ANKHQ9HCJ1 492 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 COQ3Q9NZJ6 369 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 BFARQ9NZS9 450 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 SPG11Q96JI7 2443 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 FEZF1A0PJY2 475 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 E9PLN8 166 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 NDC80O14777 642 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 PFDN6O15212 129 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 CDC40O60508 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 ESR1P03372 595 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 TPOP07202 933 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 RPL22P35268 128 aaKnown RBP16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 HSD17B2P37059 387 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 BCL6P41182 706 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 ART1P52961 327 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 NSDHLQ15738 373 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 CD163Q86VB7 1156 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 KIF2BQ8N4N8 673 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 ALKBH8Q96BT7 664 aaKnown RBP16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 CCDC138Q96M89 665 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 SLC30A3Q99726 388 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 VKORC1Q9BQB6 163 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 IL22Q9GZX6 179 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 ENKD1Q9H0I2 346 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 MMP25Q9NPA2 562 aa16.73■□□□□ 0.27
PDLIM4-202ENST00000379018 ADAM10O14672 748 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 NEURL1O76050 574 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 OR4D2P58180 307 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 USP10Q14694 798 aaKnown RBP16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 TYSND1Q2T9J0 566 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 FGD2Q7Z6J4 655 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 TMEM200AQ86VY9 491 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 CYP4X1Q8N118 509 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 EID3Q8N140 333 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 KCT2Q8NC54 265 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 PHF10Q8WUB8 498 aaKnown RBP16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 DMRTA2Q96SC8 542 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 NAV3Q8IVL0 2385 aa16.72■□□□□ 0.27
PDLIM4-202ENST00000379018 NKX2-6A6NCS4 301 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 TFECO14948 347 aaPredicted RBP16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 CYC1P08574 325 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 COILP38432 576 aaPredicted RBP16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 SLC26A5P58743 744 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 RPS15AP62244 130 aaKnown RBP16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 TTLL9Q3SXZ7 439 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 TMEM214Q6NUQ4 689 aaKnown RBP16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 PDSS2Q86YH6 399 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 CHERPQ8IWX8 916 aaKnown RBP16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 PRELID2Q8N945 189 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 OR5T3Q8NGG3 340 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 GIMAP7Q8NHV1 300 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 PANX2Q96RD6 677 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 CCDC177Q9NQR7 707 aaPredicted RBP16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 SH2B3Q9UQQ2 575 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 NAALAD2Q9Y3Q0 740 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 ASB1Q9Y576 335 aa16.71■□□□□ 0.27
PDLIM4-202ENST00000379018 A0A1B0GTH9 108 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 NME2P1O60361 137 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 CD1EP15812 388 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 NME2P22392 152 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 TPP2P29144 1249 aaPredicted RBP16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 IMPA1P29218 277 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 NPY2RP49146 381 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 TBPL1P62380 186 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 OLR1P78380 273 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 RHAGQ02094 409 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 ASPGQ86U10 573 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 SLC13A5Q86YT5 568 aaPredicted RBP16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 CAMKVQ8NCB2 501 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 NRGNQ92686 78 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 HES6Q96HZ4 224 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 UCK2Q9BZX2 261 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 EIF2B3Q9NR50 452 aaKnown RBP16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 TMEM184CQ9NVA4 438 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 CAPN6Q9Y6Q1 641 aa16.7■□□□□ 0.26
PDLIM4-202ENST00000379018 OGNP20774 298 aaKnown RBP16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 PTGS2P35354 604 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 CYB561P49447 251 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 MEOX1P50221 254 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 CLCN7P51798 805 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 ITGA8P53708 1063 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 RELAQ04206 551 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 KIF5AQ12840 1032 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 CASC4Q6P4E1 433 aa16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 UBE2R2Q712K3 238 aaPredicted RBP16.69■□□□□ 0.26
PDLIM4-202ENST00000379018 CENPUQ71F23 418 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms