RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZNF195O14628 629 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 ETHE1O95571 254 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 HPCAL1P37235 193 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 DHPSP49366 369 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 FBXW4P57775 412 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 CDKL1Q00532 357 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SFSWAPQ12872 951 aaKnown RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF77Q15935 545 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM26Q6ZUK4 368 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 FBXO15Q8NCQ5 510 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 NFKBIDQ8NI38 313 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 THAP11Q96EK4 314 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 RIPOR3Q96MK2 946 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 COL21A1Q96P44 957 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 ASB2Q96Q27 587 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 GAL3ST4Q96RP7 486 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 RPF2Q9H7B2 306 aaKnown RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 MRPS30Q9NP92 439 aaKnown RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 C11orf16Q9NQ32 467 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 CD207Q9UJ71 328 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 HS3ST2Q9Y278 367 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 PCDHB14Q9Y5E9 798 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 PCYT1BQ9Y5K3 369 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SPTBN4Q9H254 2564 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TANC1Q9C0D5 1861 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 OR10H2O60403 315 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 MOSPD3O75425 235 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 LAMP2P13473 410 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 MTA1Q13330 715 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 IRF4Q15306 451 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 GPR68Q15743 365 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SMAD2Q15796 467 aaKnown RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 DEFB133Q30KQ1 61 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 KCTD21Q4G0X4 260 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 AFMIDQ63HM1 303 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 PRR23BQ6ZRT6 265 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 RNF44Q7L0R7 432 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 CNTN4Q8IWV2 1026 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 KIAA2013Q8IYS2 634 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SIX5Q8N196 739 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 LMX1AQ8TE12 382 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 ATL1Q8WXF7 558 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TMBIM1Q969X1 311 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 DACT3Q96B18 629 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 ALG14Q96F25 216 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF641Q96N77 438 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 KCNC2Q96PR1 638 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SLC35A5Q9BS91 424 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TRIT1Q9H3H1 467 aaKnown RBP7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TPT1P8Q9HAU6 139 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 FGF22Q9HCT0 170 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 FSCN3Q9NQT6 498 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SLC6A13Q9NSD5 602 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 FNIP2Q9P278 1114 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 GTF2A1LQ9UNN4 478 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SORCS3Q9UPU3 1222 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 TSPAN12O95859 305 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 SDC1P18827 310 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 MAPK1P28482 360 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 TRAF3Q13114 568 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF776Q68DI1 518 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-203ENST00000378037 CHSY3Q70JA7 882 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 LPCAT2Q7L5N7 544 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 ZDHHC21Q8IVQ6 265 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 KRT78Q8N1N4 520 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 FRS2Q8WU20 508 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 MPP4Q96JB8 637 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 SIKE1Q9BRV8 207 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 NLNQ9BYT8 704 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 REEP1Q9H902 201 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF556Q9HAH1 456 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 HRASLS2Q9NWW9 162 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 GMEB2Q9UKD1 530 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 MKL2Q9ULH7 1088 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 ENTPD4Q9Y227 616 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 PCDHGA11Q9Y5H2 935 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 A0A1W2PRB8 838 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 G3V2T6 193 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 PLOD2O00469 737 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 RGS5O15539 181 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 NTSR1P30989 418 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 NCBP2P52298 156 aaKnown RBP eCLIP7.8□□□□□ -1.16
CKAP2-203ENST00000378037 VSX2P58304 361 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF423Q2M1K9 1284 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 FIGNL1Q6PIW4 674 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 KLHL17Q6TDP4 642 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 CYS1Q717R9 158 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 AHSA2Q719I0 299 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 IQCHQ86VS3 1027 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 EID3Q8N140 333 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 OR9A1PQ8NGU1 263 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 GLMNQ92990 594 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 AIF1LQ9BQI0 150 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 TCEAL2Q9H3H9 227 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-203ENST00000378037 MEAF6Q9HAF1 191 aa7.8□□□□□ -1.16
CKAP2-203ENST00000378037 MRM3Q9HC36 420 aaKnown RBP7.8□□□□□ -1.16
CKAP2-203ENST00000378037 WDR37Q9Y2I8 494 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms