RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 PWP1Q13610 501 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 TBCCQ15814 346 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ARHGAP40Q5TG30 622 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 NIPAL1Q6NVV3 410 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ZNF517Q6ZMY9 492 aaPredicted RBP13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ABHD13Q7L211 337 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 VN1R4Q7Z5H5 301 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 SLC22A9Q8IVM8 553 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 CYP4X1Q8N118 509 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 METTL27Q8N6F8 245 aaPredicted RBP13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ENDOVQ8N8Q3 282 aaKnown RBP13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ZCCHC10Q8TBK6 192 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 RDH11Q8TC12 318 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 CCT6BQ92526 530 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 COL26A1Q96A83 441 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 WDR34Q96EX3 536 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 APOPT1Q96IL0 206 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 SLC45A3Q96JT2 553 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 C10orf90Q96M02 699 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 STMN4Q9H169 189 aaPredicted RBP13.82□□□□□ -0.2
UBE4B-203ENST00000377153 SPNS1Q9H2V7 528 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 CENPHQ9H3R5 247 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ACTL8Q9H568 366 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 CPNE5Q9HCH3 593 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ZNF304Q9HCX3 659 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ASB1Q9Y576 335 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 PCDHGA6Q9Y5G7 932 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 EPG5Q9HCE0 2579 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 PKD1L2Q7Z442 2459 aa13.82□□□□□ -0.2
UBE4B-203ENST00000377153 ANKDD1BA6NHY2 528 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 A8MT66 165 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 E2F3O00716 465 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 UGDHO60701 494 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 SIX3O95343 332 aaPredicted RBP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 STATHP02808 62 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 RAB40ALP0C0E4 278 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 ATP5F1P24539 256 aaPredicted RBP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 PTPN4P29074 926 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 SERPINB1P30740 379 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 CRHR1P34998 444 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 GCGRP47871 477 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 STXBP1P61764 594 aaKnown RBP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 HERVK_113P63132 956 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 FAM53BQ14153 422 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 DOC2AQ14183 400 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 SLC9A5Q14940 896 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 HERC3Q15034 1050 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 COL28A1Q2UY09 1125 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 MLIPQ5VWP3 458 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 ZNF385CQ66K41 422 aaPredicted RBP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 C19orf48Q6RUI8 117 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 FAM198BQ6UWH4 519 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 GOLGA7Q7Z5G4 137 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 SYVN1Q86TM6 617 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 TRABD2AQ86V40 505 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 ZNF740Q8NDX6 193 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 REPS1Q96D71 796 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 IPPKQ9H8X2 491 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 MKS1Q9NXB0 559 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 NXT1Q9UKK6 140 aaKnown RBP13.81□□□□□ -0.2
UBE4B-203ENST00000377153 STK38LQ9Y2H1 464 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
UBE4B-203ENST00000377153 FOXO6A8MYZ6 492 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 K7ENP7 123 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 LCMT2O60294 686 aaKnown RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 ITGAXP20702 1163 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 HNF4AP41235 474 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 FOLR3P41439 243 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 CCNG1P51959 295 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 OCA2Q04671 838 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 SRSF6Q13247 344 aaKnown RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 RBBP7Q16576 425 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 LIPJQ5W064 366 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 GRHL2Q6ISB3 625 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 TMEM214Q6NUQ4 689 aaKnown RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 MED27Q6P2C8 311 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 C16orf46Q6P387 395 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 INO80CQ6PI98 192 aaPredicted RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 LRIG3Q6UXM1 1119 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 GPR155Q7Z3F1 870 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 NT5CQ8TCD5 201 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 TM4SF19Q96DZ7 209 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 YIPF2Q9BWQ6 316 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 NT5DC2Q9H857 520 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 WDR54Q9H977 334 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 SYNPO2LQ9H987 977 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 COPG2Q9UBF2 871 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 ZNF282Q9UDV7 671 aaPredicted RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 IL17BQ9UHF5 180 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 PCTPQ9UKL6 214 aa13.8□□□□□ -0.2
UBE4B-203ENST00000377153 FARSAQ9Y285 508 aaKnown RBP13.8□□□□□ -0.2
UBE4B-203ENST00000377153 MAU2Q9Y6X3 613 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms