RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PSIP1O75475 530 aaKnown RBP13.19□□□□□ -0.3
C9orf47-203ENST00000375851 CTSAP10619 480 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 GNSP15586 552 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 TCEA1P23193 301 aaKnown RBP13.19□□□□□ -0.3
C9orf47-203ENST00000375851 BMPR1AP36894 532 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 TIGD6Q17RP2 521 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 TSPAN33Q86UF1 283 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 TCEAL8Q8IYN2 117 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 P2RY13Q9BPV8 354 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 KCNH6Q9H252 994 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 RPF2Q9H7B2 306 aaKnown RBP13.19□□□□□ -0.3
C9orf47-203ENST00000375851 RPRD1BQ9NQG5 326 aaKnown RBP13.19□□□□□ -0.3
C9orf47-203ENST00000375851 SPO11Q9Y5K1 396 aa13.19□□□□□ -0.3
C9orf47-203ENST00000375851 LOC100130705A0A1B0GUX0 176 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 GLOD5A6NK44 160 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 EFCAB9A8MZ26 197 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 KAT7O95251 611 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 PDYNP01213 254 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 ARCN1P48444 511 aaKnown RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 NUDT6P53370 316 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 CEACAM7Q14002 265 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 C10orf62Q5T681 223 aaPredicted RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 RNF130Q86XS8 419 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 SMARCD2Q92925 531 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 RAB8BQ92930 207 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 SCRN2Q96FV2 425 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 TRIB3Q96RU7 358 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 A8MUA0 341 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 MAGEB3O15480 346 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 SPINT3P49223 89 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 CYBRD1Q53TN4 286 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 RNASE12Q5GAN4 147 aaKnown RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 SLC15A3Q8IY34 581 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 KRTCAP2Q8N6L1 136 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 TRNT1Q96Q11 434 aaKnown RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 MGME1Q9BQP7 344 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 KCNN2Q9H2S1 579 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 ZNF222Q9UK12 451 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 DAPL1A0PJW8 107 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 CAPN5O15484 640 aaPredicted RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 PRMT3O60678 531 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 DHFRP00374 187 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 TYRP1P17643 537 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 VEGFBP49765 207 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 SH3BP2P78314 561 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 NTHL1P78549 312 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 ABRAXAS2Q15018 415 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 KIAA1161Q6NSJ0 714 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 ZFAND4Q86XD8 727 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 OR6K6Q8NGW6 343 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 RIMKLBQ9ULI2 386 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 TMEM189-UBE2V1I3L0A0 370 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 TLR4O00206 839 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 BOCQ9BWV1 1114 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 CSNK1G1Q9HCP0 422 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 PNO1Q9NRX1 252 aaKnown RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 COMMD9Q9P000 198 aa13.18□□□□□ -0.3
C9orf47-203ENST00000375851 SPIN1Q9Y657 262 aaPredicted RBP13.18□□□□□ -0.3
C9orf47-203ENST00000375851 CPED1A4D0V7 1026 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 GSTM3P21266 225 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ETV4P43268 484 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 GRIK2Q13002 908 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ZBED5Q49AG3 693 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 OR56A1Q8NGH5 318 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 UFD1Q92890 307 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 MARCH7Q9H992 704 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 SFXN1Q9H9B4 322 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 SMURF2Q9HAU4 748 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ELOA3DA6NLF2 546 aaPredicted RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 CLIC3O95833 236 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 MAGEA6P43360 314 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 PPP2R2BQ00005 443 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 DOC2AQ14183 400 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ELOA3BQ3SY89 546 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 REEP3Q6NUK4 255 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ELOA3Q8NG57 546 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 OR8J3Q8NGG0 315 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 SAMD11Q96NU1 681 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 TBL1XR1Q9BZK7 514 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 GALNT8Q9NY28 637 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 G3V2L1 256 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 HTRA2O43464 458 aaPredicted RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 B4GALT2O60909 372 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 CSTF2P33240 577 aaKnown RBP eCLIP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 MLLT3P42568 568 aaPredicted RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ARFIP1P53367 373 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 ARSFP54793 590 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 RPS21P63220 83 aaKnown RBP13.17□□□□□ -0.3
C9orf47-203ENST00000375851 BICRALQ6AI39 1079 aa13.17□□□□□ -0.3
C9orf47-203ENST00000375851 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms