RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IMPA1P29218 277 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 PTPN6P29350 595 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 OCA2Q04671 838 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 CSTF3Q12996 717 aaKnown RBP13.49□□□□□ -0.25
MSH5-202ENST00000375740 ATAD3BQ5T9A4 648 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 BROXQ5VW32 411 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 PLEKHG7Q6ZR37 379 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 CALHM3Q86XJ0 350 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 CFAP206Q8IYR0 622 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 TMBIM1Q969X1 311 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 FAM120BQ96EK7 910 aaKnown RBP13.49□□□□□ -0.25
MSH5-202ENST00000375740 DPP7Q9UHL4 492 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 CHD7Q9P2D1 2997 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 ABCB7O75027 752 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 INMTO95050 263 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 PRSS23O95084 383 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 RB1P06400 928 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 ACPPP15309 386 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 HOXB9P17482 250 aaPredicted RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 MTHFRP42898 656 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 CTF1Q16619 201 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 GAB4Q2WGN9 574 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 SYT12Q8IV01 421 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 MFSD4AQ8N468 514 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 OR7A2PQ8NGA2 310 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 CSGALNACT1Q8TDX6 532 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 HTRA1Q92743 480 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 FCRL1Q96LA6 429 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 FOPNLQ96NB1 174 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 HHIPQ96QV1 700 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 HOXD1Q9GZZ0 328 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 DEC1Q9P2X7 70 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 UTS2RQ9UKP6 389 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 NUP210Q8TEM1 1887 aaPredicted RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 H3BM21 787 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 RFXANKO14593 260 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 MMP20O60882 483 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 CREG1O75629 220 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 PRKD3O94806 890 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 MYCLP1P12525 358 aaPredicted RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 PRPS1L1P21108 318 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 FSHRP23945 695 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 CRHBPP24387 322 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 ITGB7P26010 798 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 PON2Q15165 354 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 ZNF658BQ4V348 819 aaPredicted RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 ADNP2Q6IQ32 1131 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 GRHL2Q6ISB3 625 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 TMIEQ8NEW7 156 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 OR56A3Q8NH54 315 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 NETO1Q8TDF5 533 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 OR8D1Q8WZ84 308 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 SLC47A1Q96FL8 570 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 ING2Q9H160 280 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 OR2AG1Q9H205 316 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 SGK2Q9HBY8 427 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 SPATA6Q9NWH7 488 aaPredicted RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 PCDHGA11Q9Y5H2 935 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 PMF1-BGLAPU3KQ54 211 aa13.48□□□□□ -0.25
MSH5-202ENST00000375740 TCF20Q9UGU0 1960 aaKnown RBP13.48□□□□□ -0.25
MSH5-202ENST00000375740 FAM220BPB1ANY3 271 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 H0YIV9 168 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 C1QCP02747 245 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 POU2F2P09086 479 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 HNF4AP41235 474 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 KIR3DL1P43629 444 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 HNRNPFP52597 415 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 ZNF33BQ06732 778 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 CATSPEREQ5SY80 951 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 DOK6Q6PKX4 331 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 KLHDC8AQ8IYD2 350 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 NCLNQ969V3 563 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 NUS1Q96E22 293 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 EPHX3Q9H6B9 360 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 EDDM13A0A1B0GTR0 161 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 HEPACAM2A8MVW5 462 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 LILRB5O75023 590 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 UGT2B11O75310 529 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 C1orf105O95561 183 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 NFATC1O95644 943 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 PCSK2P16519 638 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 EN2P19622 333 aaPredicted RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 AGXTP21549 392 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 GPR1P46091 355 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 UGT8Q16880 541 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 FAM209AQ5JX71 171 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ANKRD34AQ69YU3 496 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ZNF551Q7Z340 670 aaPredicted RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 GPR149Q86SP6 731 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 C7orf61Q8IZ16 206 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 LMNTD1Q8N9Z9 388 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms