RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TSSK4Q6SA08 328 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SLCO4C1Q6ZQN7 724 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF765Q7L2R6 523 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SERPINA11Q86U17 422 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 MMAAQ8IVH4 418 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 KLHDC8AQ8IYD2 350 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 EID3Q8N140 333 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 GPR156Q8NFN8 814 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SNX19Q92543 992 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 TMIGD2Q96BF3 282 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SHDQ96IW2 340 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 MUS81Q96NY9 551 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ING2Q9H160 280 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ATXN10Q9UBB4 475 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 UTS2RQ9UKP6 389 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SAMD4AQ9UPU9 718 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 DYRK1BQ9Y463 629 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 CEPT1Q9Y6K0 416 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 PLXNA2O75051 1894 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 POP7O75817 140 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 ETHE1O95571 254 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HPRP00739 348 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 LAMP1P11279 417 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HOXB9P17482 250 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HNRNPFP52597 415 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CPTPQ5TA50 214 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CRTC3Q6UUV7 619 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SPESP1Q6UW49 350 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 GPR141Q7Z602 305 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 DSG4Q86SJ6 1040 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 ZCCHC7Q8N3Z6 543 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CPA6Q8N4T0 437 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 FBXO15Q8NCQ5 510 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 OR10Q1Q8NGQ4 319 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 FAM129BQ96TA1 746 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 RBM4BQ9BQ04 359 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 DUSP26Q9BV47 211 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 RBM4Q9BWF3 364 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SMURF2Q9HAU4 748 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 FAM86C1Q9NVL1 165 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 RSL24D1Q9UHA3 163 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 MAPRE3Q9UPY8 281 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SCAMP2O15127 329 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 NOBOXO60393 691 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 NPPBP16860 134 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 IL1RNP18510 177 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HPCAL1P37235 193 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 PNLIPRP1P54315 467 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 TPD52P55327 224 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SEC13P55735 322 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 RPS13P62277 151 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 DPTQ07507 201 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 TCF15Q12870 199 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SLC14A1Q13336 389 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SPIDRQ14159 915 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 MYBPC3Q14896 1274 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HIST2H2ACQ16777 129 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HKDC1Q2TB90 917 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 PAGE2BQ5JRK9 111 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CATSPEREQ5SY80 951 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CCNYL2Q5T2Q4 361 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 HIST2H2AA3Q6FI13 130 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 USP51Q70EK9 711 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 ERN2Q76MJ5 926 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 LPCAT2Q7L5N7 544 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CLECL1Q8IZS7 167 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF555Q8NEP9 628 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 OR9A1PQ8NGU1 263 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CXorf40AQ8TE69 158 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 SH3KBP1Q96B97 665 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 RDH12Q96NR8 316 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
HMGCL-202ENST00000374487 YTHDF1Q9BYJ9 559 aaKnown RBP11.64□□□□□ -0.55
HMGCL-202ENST00000374487 CROCCQ5TZA2 2017 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF318Q5VUA4 2279 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 ATG2BQ96BY7 2078 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 C17orf113A0A1B0GUU1 675 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 GABRR3A8MPY1 467 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 C1QTNF3-AMACRE9PGA6 284 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 LILRB5O75023 590 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF8P17098 575 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 EFNA1P20827 205 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 EEF1B2P24534 225 aaKnown RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 WNT3P56703 355 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 EPS8Q12929 822 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 PPP1R8Q12972 351 aaKnown RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 CCINQ13939 588 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM196Q5HYL7 178 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 TTC23Q5W5X9 447 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 MAML2Q8IZL2 1156 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 HS3ST5Q8IZT8 346 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 DTWD2Q8NBA8 298 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 PNPT1Q8TCS8 783 aaKnown RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 CHTF18Q8WVB6 975 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 C11orf24Q96F05 449 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-202ENST00000374487 HIC2Q96JB3 615 aa11.63□□□□□ -0.55
HMGCL-202ENST00000374487 EFCAB11Q9BUY7 163 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms