RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ACKR2O00590 384 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 KCNJ13O60928 360 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ZNF432O94892 652 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SERPIND1P05546 499 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TGFBR1P36897 503 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 PIGAP37287 484 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CLCN3P51790 818 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CNTN2Q02246 1040 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 BCL2L1Q07817 233 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 GK2Q14410 553 aaPredicted RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 TTLL4Q14679 1199 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SLC46A3Q7Z3Q1 461 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 KRT77Q7Z794 578 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 BEND7Q8N7W2 519 aaPredicted RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 CLRN3Q8NCR9 226 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SERPINB11Q96P15 392 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 OR4K3Q96R72 315 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ULBP1Q9BZM6 244 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TFB2MQ9H5Q4 396 aaKnown RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 MAGIXQ9H6Y5 334 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TMEM185BQ9H7F4 350 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 TPT1P8Q9HAU6 139 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 RAD18Q9NS91 495 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 REV1Q9UBZ9 1251 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 SLC43A1O75387 559 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ZNF35P13682 527 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ALAS2P22557 587 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 GABRB3P28472 473 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CLCNKBP51801 687 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 XKP51811 444 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ATXN7L3Q14CW9 347 aaPredicted RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 EIF4HQ15056 248 aaKnown RBP9.94□□□□□ -0.82
CD28-202ENST00000374481 PGM5Q15124 567 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 ENTHD1Q8IYW4 607 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 CSF3RQ99062 836 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 DNTTIP1Q9H147 329 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 KIF13AQ9H1H9 1805 aa9.94□□□□□ -0.82
CD28-202ENST00000374481 LRRN3E7EW58 273 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 OPN1SWP03999 348 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 INHBBP09529 407 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 AVPR1BP47901 424 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 HMGCS1Q01581 520 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SREBF2Q12772 1141 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SLC35F1Q5T1Q4 408 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TSTD2Q5T7W7 516 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 CPTPQ5TA50 214 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TTLQ8NG68 377 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 RFKQ969G6 155 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 NELL2Q99435 816 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 GAL3ST1Q99999 423 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SEC22CQ9BRL7 303 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TRAF4Q9BUZ4 470 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 BTBD2Q9BX70 525 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SPNS1Q9H2V7 528 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 LRRN3Q9H3W5 708 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SLC28A3Q9HAS3 691 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 MIOSQ9NXC5 875 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 CYB5R1Q9UHQ9 305 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SCP2D1Q9UJQ7 156 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ERVK-19Q9WJR5 959 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TRBC1P01850 177 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ITGAMP11215 1152 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 EFNA1P20827 205 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 DGKAP23743 735 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 PTPN6P29350 595 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 RBM34P42696 430 aaKnown RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 FBXO47Q5MNV8 452 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ATAT1Q5SQI0 421 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 AVPI1Q5T686 147 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ANXA8L1Q5VT79 327 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 IRAK1BP1Q5VVH5 260 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 APOBEC3HQ6NTF7 200 aaKnown RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 TMEM135Q86UB9 458 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 OSTM1Q86WC4 334 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 LSMEM2Q8N112 164 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 KCNJ9Q92806 393 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 C14orf105Q9NVL8 296 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TUBGCP6Q96RT7 1819 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SPATA31A1Q5TZJ5 1347 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 F5H0A9 414 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 TSTD3H0UI37 97 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 PPEF2O14830 753 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TLX2O43763 284 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 CREBL2O60519 120 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 FABP1P07148 127 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 PRPS2P11908 318 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ZNF250P15622 560 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 PIK3CBP42338 1070 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TGM4P49221 684 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TTPAP49638 278 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 MIB1Q86YT6 1006 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TCEANCQ8N8B7 351 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 BOLLQ8N9W6 283 aaKnown RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 AQP11Q8NBQ7 271 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 TP53I13Q8NBR0 393 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 BEST4Q8NFU0 473 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms