RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ENO3P13929 434 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 HRH2P25021 359 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 COILP38432 576 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 MAGEA6P43360 314 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 AGTR2P50052 363 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 SMSP52788 366 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 TBPL1P62380 186 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 CSNK1G2P78368 415 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 DHX34Q14147 1143 aaKnown RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 TRIP13Q15645 432 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 EXT1Q16394 746 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 MEP1AQ16819 746 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 ANKRD22Q5VYY1 191 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 ARMC3Q5W041 872 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 CASC4Q6P4E1 433 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 PIWIL4Q7Z3Z4 852 aaKnown RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 SPPL2CQ8IUH8 684 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 SIAH3Q8IW03 269 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 KCT2Q8NC54 265 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 M1APQ8TC57 530 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 CD200R1Q8TD46 325 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 MCOLN3Q8TDD5 553 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 TM4SF19Q96DZ7 209 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 CCDC138Q96M89 665 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 FRMD6Q96NE9 622 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 GPR21Q99679 349 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 UTP23Q9BRU9 249 aaKnown RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 MMP25Q9NPA2 562 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 CCDC177Q9NQR7 707 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-202ENST00000374426 MEMO1Q9Y316 297 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 DHRS7Q9Y394 339 aa12.99□□□□□ -0.33
CXCL12-202ENST00000374426 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ZCWPW2A0A1B0GU75 182 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 FAM237BA0A1B0GVD1 139 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 FEZF1A0PJY2 475 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 NPIPA5E9PKD4 350 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 RDH16O75452 317 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 NEURL1O76050 574 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 EEF1DP29692 281 aaKnown RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 KIR3DL1P43629 444 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 RHAGQ02094 409 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ALDH6A1Q02252 535 aaKnown RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ABRAXAS2Q15018 415 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 NSDHLQ15738 373 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 SFT2D3Q587I9 215 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 PAPD4Q6PIY7 484 aaKnown RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 NCCRP1Q6ZVX7 275 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 UBE2R2Q712K3 238 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 CPNE9Q8IYJ1 553 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 CAMKVQ8NCB2 501 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 TSLPQ969D9 159 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF669Q96BR6 464 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 MTFMTQ96DP5 389 aaKnown RBP12.98□□□□□ -0.33
CXCL12-202ENST00000374426 THAP11Q96EK4 314 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 TRIM51Q9BSJ1 452 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 CCDC68Q9H2F9 335 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ANKHQ9HCJ1 492 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 LANCL2Q9NS86 450 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 NPIPA1Q9UND3 350 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 ITPR3Q14573 2671 aa12.98□□□□□ -0.33
CXCL12-202ENST00000374426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 GABRR3A8MPY1 467 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 ZNHIT1O43257 154 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 LCMT2O60294 686 aaKnown RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 CDC123O75794 336 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 CLDN14O95500 239 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 MLYCDO95822 493 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 CD46P15529 392 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SLC1A2P43004 574 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 VPS41P49754 854 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 GPS1Q13098 491 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 THOC5Q13769 683 aaKnown RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 USP10Q14694 798 aaKnown RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 MBOAT1Q6ZNC8 495 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 GALNTL5Q7Z4T8 443 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 ASPGQ86U10 573 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SLC26A11Q86WA9 606 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 CHERPQ8IWX8 916 aaKnown RBP12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SLC5A8Q8N695 610 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 TMEM178AQ8NBL3 297 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 PLPP5Q8NEB5 264 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SLC13A3Q8WWT9 602 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 PEX11GQ96HA9 241 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 LPAR4Q99677 370 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 PCBD2Q9H0N5 130 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SAMD15Q9P1V8 674 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 ADAMTS6Q9UKP5 1117 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 PDE10AQ9Y233 779 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 NAALAD2Q9Y3Q0 740 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 SLC22A7Q9Y694 548 aa12.97□□□□□ -0.33
CXCL12-202ENST00000374426 MED13LQ71F56 2210 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 MAGEB16A2A368 324 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF860A6NHJ4 632 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms