RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SEC14L1Q92503 715 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 TEPSINQ96N21 525 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ANKHQ9HCJ1 492 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 VIPR1P32241 457 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 FNTBP49356 437 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 UGT8Q16880 541 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 OR2AP1Q8NGE2 309 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 FUZQ9BT04 418 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF12P17014 697 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 AGXTP21549 392 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 PRDX6P30041 224 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 NFKB2Q00653 900 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ITPRIPL2Q3MIP1 535 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 MS4A13Q5J8X5 152 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 RBM20Q5T481 1227 aaKnown RBP13.91□□□□□ -0.18
TRAF1-201ENST00000373887 HMBOX1Q6NT76 420 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ADGRD1Q6QNK2 874 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 CASTOR1Q8WTX7 329 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 ACDQ96AP0 544 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 MIPEPQ99797 713 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 SLC35A5Q9BS91 424 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 DNAJB9Q9UBS3 223 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 SLC2A6Q9UGQ3 507 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 IFT52Q9Y366 437 aa13.91□□□□□ -0.18
TRAF1-201ENST00000373887 A0A1W2PRB8 838 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 A8MV72 311 aaPredicted RBP13.9□□□□□ -0.18
TRAF1-201ENST00000373887 NR0B1P51843 470 aaKnown RBP13.9□□□□□ -0.18
TRAF1-201ENST00000373887 TMEM68Q96MH6 324 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 WACQ9BTA9 647 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 CADM1Q9BY67 442 aaKnown RBP13.9□□□□□ -0.18
TRAF1-201ENST00000373887 DPAGT1Q9H3H5 408 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 COCHO43405 550 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 GADD45AP24522 165 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 TAS2R50P59544 299 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 S100A12P80511 92 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 KLHL6Q8WZ60 621 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 PCYT2Q99447 389 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 CLCA3PQ9Y6N3 262 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 ABLIM1O14639 778 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 MAFKO60675 156 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 PRPS2P11908 318 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 NUDT6P53370 316 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 PTPRCAPQ14761 206 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF542PQ5EBM4 170 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 LRRTM4Q86VH4 590 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF431Q8TF32 576 aaPredicted RBP13.9□□□□□ -0.18
TRAF1-201ENST00000373887 BORCS8Q96FH0 119 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 DGAT2Q96PD7 388 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 P2RY13Q9BPV8 354 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 KCTD3Q9Y597 815 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 CCDC163A0A0D9SF12 145 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 TMEM150CB9EJG8 249 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 NPIPA5E9PKD4 350 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 ESR1P03372 595 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 CBLP22681 906 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 GPR17Q13304 367 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 ENPP2Q13822 863 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 CDK10Q15131 360 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 SUN3Q8TAQ9 357 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 MAFIPQ8WZ33 124 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 PKP4Q99569 1192 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 NPIPA1Q9UND3 350 aa13.9□□□□□ -0.18
TRAF1-201ENST00000373887 TCRBV7S3A2A0A539 114 aa13.9□□□□□ -0.19
TRAF1-201ENST00000373887 C9J4A7 227 aa13.9□□□□□ -0.19
TRAF1-201ENST00000373887 TRAPPC6AO75865 159 aa13.9□□□□□ -0.19
TRAF1-201ENST00000373887 STK19P49842 368 aaPredicted RBP13.9□□□□□ -0.19
TRAF1-201ENST00000373887 SLBPQ14493 270 aaKnown RBP eCLIP13.9□□□□□ -0.19
TRAF1-201ENST00000373887 PIM3Q86V86 326 aa13.9□□□□□ -0.19
TRAF1-201ENST00000373887 COL21A1Q96P44 957 aa13.9□□□□□ -0.19
TRAF1-201ENST00000373887 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.19
TRAF1-201ENST00000373887 ILVBLA1L0T0 632 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 C2orf78A6NCI8 922 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 OTOL1A6NHN0 477 aaPredicted RBP13.89□□□□□ -0.19
TRAF1-201ENST00000373887 HSPA12AO43301 675 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 RPA4Q13156 261 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 MTFR2Q6P444 385 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 FCGR1BQ92637 280 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 WDR77Q9BQA1 342 aaPredicted RBP13.89□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF649Q9BS31 505 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 BRF2Q9HAW0 419 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 FZD4Q9ULV1 537 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 BCHEP06276 602 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 ATP5A1P25705 553 aaKnown RBP13.89□□□□□ -0.19
TRAF1-201ENST00000373887 RFTN1Q14699 578 aaPredicted RBP13.89□□□□□ -0.19
TRAF1-201ENST00000373887 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 INAVAQ3KP66 663 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 SLC22A16Q86VW1 577 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 HDAC2Q92769 488 aaKnown RBP13.89□□□□□ -0.19
TRAF1-201ENST00000373887 SERINC1Q9NRX5 453 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 TNFRSF10DQ9UBN6 386 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 PDLIM1O00151 329 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 KCNJ13O60928 360 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 CYP11A1P05108 521 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 RAB39AQ14964 217 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 UPP1Q16831 310 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 C22orf39Q6P5X5 142 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms