RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DCUN1D5Q9BTE7 237 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 ZDHHC5Q9C0B5 715 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 DMRT3Q9NQL9 472 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 RPS6KA6Q9UK32 745 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 FKBP9O95302 570 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 FABP3P05413 133 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 CDK4P11802 303 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 ACADLP28330 430 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 PNLIPRP1P54315 467 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 MC1RQ01726 317 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 DPTQ07507 201 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 TMEM52BQ4KMG9 183 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 RBM48Q5RL73 367 aaKnown RBP18.02■□□□□ 0.47
USP49-202ENST00000373010 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.02■□□□□ 0.47
USP49-202ENST00000373010 LAIR2Q6ISS4 152 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 CBLL1Q75N03 491 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 CAMKMTQ7Z624 323 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 C11orf96Q7Z7L8 435 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 CACUL1Q86Y37 369 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 VPS37AQ8NEZ2 397 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 ZFP90Q8TF47 636 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 SLC5A11Q8WWX8 675 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 HDAC2Q92769 488 aaKnown RBP18.02■□□□□ 0.47
USP49-202ENST00000373010 FGF13Q92913 245 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 SMARCD2Q92925 531 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 WDR34Q96EX3 536 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 PPP1R16AQ96I34 528 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 EFCAB11Q9BUY7 163 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 TMEM106CQ9BVX2 250 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 CHST8Q9H2A9 424 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 DPP7Q9UHL4 492 aa18.02■□□□□ 0.47
USP49-202ENST00000373010 ATE1O95260 518 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 POU2F2P09086 479 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 HOXB6P17509 224 aaKnown RBP18.01■□□□□ 0.47
USP49-202ENST00000373010 AQP1P29972 269 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 P2RY2P41231 377 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 IL12RB1P42701 662 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 IL1RL1Q01638 556 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 PIGFQ07326 219 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 ANXA8L1Q5VT79 327 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 BROXQ5VW32 411 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 FAM109BQ6ICB4 259 aaPredicted RBP18.01■□□□□ 0.47
USP49-202ENST00000373010 NXPE4Q6UWF7 544 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 ZNF852Q6ZMS4 543 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 EIF3MQ7L2H7 374 aaKnown RBP18.01■□□□□ 0.47
USP49-202ENST00000373010 LAS2Q8IYD9 372 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 OR2L2Q8NH16 312 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 TPD52L3Q96J77 140 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 CERS4Q9HA82 394 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 TM9SF3Q9HD45 589 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 ORC6Q9Y5N6 252 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 TBC1D3BA6NDS4 549 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 CPNE6O95741 557 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 IGFBP5P24593 272 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 CRYBA2P53672 197 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 MAPK10P53779 464 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 RGNQ15493 299 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 GALNT18Q6P9A2 607 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 NAGSQ8N159 534 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 TERB1Q8NA31 727 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 OR5AR1Q8NGP9 310 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 CXorf40AQ8TE69 158 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 LINC00615Q96LM1 132 aaPredicted RBP18.01■□□□□ 0.47
USP49-202ENST00000373010 CCDC177Q9NQR7 707 aaPredicted RBP18.01■□□□□ 0.47
USP49-202ENST00000373010 ASF1AQ9Y294 204 aa18.01■□□□□ 0.47
USP49-202ENST00000373010 H3BMQ9 156 aa18■□□□□ 0.47
USP49-202ENST00000373010 CA3P07451 260 aa18■□□□□ 0.47
USP49-202ENST00000373010 DCKP27707 260 aa18■□□□□ 0.47
USP49-202ENST00000373010 DAPP51397 102 aa18■□□□□ 0.47
USP49-202ENST00000373010 RAD23AP54725 363 aa18■□□□□ 0.47
USP49-202ENST00000373010 ISL1P61371 349 aa18■□□□□ 0.47
USP49-202ENST00000373010 ZNF763Q0D2J5 394 aa18■□□□□ 0.47
USP49-202ENST00000373010 CNTN1Q12860 1018 aa18■□□□□ 0.47
USP49-202ENST00000373010 GPM6BQ13491 265 aa18■□□□□ 0.47
USP49-202ENST00000373010 EIF4HQ15056 248 aaKnown RBP18■□□□□ 0.47
USP49-202ENST00000373010 PAGE2BQ5JRK9 111 aa18■□□□□ 0.47
USP49-202ENST00000373010 ZNF691Q5VV52 312 aa18■□□□□ 0.47
USP49-202ENST00000373010 C7orf61Q8IZ16 206 aa18■□□□□ 0.47
USP49-202ENST00000373010 PUM2Q8TB72 1066 aaKnown RBP eCLIP18■□□□□ 0.47
USP49-202ENST00000373010 SUSD6Q92537 303 aa18■□□□□ 0.47
USP49-202ENST00000373010 ZNF514Q96K75 400 aaPredicted RBP18■□□□□ 0.47
USP49-202ENST00000373010 COG8Q96MW5 612 aa18■□□□□ 0.47
USP49-202ENST00000373010 OR52A5Q9H2C5 316 aa18■□□□□ 0.47
USP49-202ENST00000373010 REEP4Q9H6H4 257 aa18■□□□□ 0.47
USP49-202ENST00000373010 TIMMDC1Q9NPL8 285 aa18■□□□□ 0.47
USP49-202ENST00000373010 ITM2CQ9NQX7 267 aa18■□□□□ 0.47
USP49-202ENST00000373010 C17orf113A0A1B0GUU1 675 aa18■□□□□ 0.47
USP49-202ENST00000373010 ZNF701M0R085 212 aaPredicted RBP18■□□□□ 0.47
USP49-202ENST00000373010 FOXE1O00358 373 aaPredicted RBP18■□□□□ 0.47
USP49-202ENST00000373010 ABCB7O75027 752 aa18■□□□□ 0.47
USP49-202ENST00000373010 KLHL18O94889 574 aa18■□□□□ 0.47
USP49-202ENST00000373010 RB1P06400 928 aa18■□□□□ 0.47
USP49-202ENST00000373010 EPHX1P07099 455 aa18■□□□□ 0.47
USP49-202ENST00000373010 HTR1AP08908 422 aa18■□□□□ 0.47
USP49-202ENST00000373010 CYP4B1P13584 511 aa18■□□□□ 0.47
USP49-202ENST00000373010 TTKP33981 857 aa18■□□□□ 0.47
USP49-202ENST00000373010 HIST2H2ACQ16777 129 aaPredicted RBP18■□□□□ 0.47
USP49-202ENST00000373010 AP1ARQ63HQ0 302 aa18■□□□□ 0.47
USP49-202ENST00000373010 HIST2H2AA3Q6FI13 130 aa18■□□□□ 0.47
USP49-202ENST00000373010 XAF1Q6GPH4 301 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms