RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 GPS2Q13227 327 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 FAM53BQ14153 422 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 DOC2AQ14183 400 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 CASP8Q14790 479 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 PRTGQ2VWP7 1150 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 MED27Q6P2C8 311 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 ZYG11AQ6WRX3 759 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 SH2D5Q6ZV89 423 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 ABHD13Q7L211 337 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 HDXQ7Z353 690 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 TIPARPQ7Z3E1 657 aaKnown RBP13.13□□□□□ -0.31
SSR4-202ENST00000370085 GOLGA7Q7Z5G4 137 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 SPACA3Q8IXA5 215 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 BANPQ8N9N5 519 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 WDR34Q96EX3 536 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 STARD5Q9NSY2 213 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
SSR4-202ENST00000370085 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
SSR4-202ENST00000370085 DHCR7Q9UBM7 475 aaKnown RBP13.13□□□□□ -0.31
SSR4-202ENST00000370085 ADGRE2Q9UHX3 823 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 RUVBL1Q9Y265 456 aaKnown RBP13.13□□□□□ -0.31
SSR4-202ENST00000370085 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
SSR4-202ENST00000370085 A0A088AWK7 358 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 TEX51A0A1B0GUA7 166 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 E2F3O00716 465 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 LCMT2O60294 686 aaKnown RBP13.12□□□□□ -0.31
SSR4-202ENST00000370085 DLX3O60479 287 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 SUPT7LO94864 414 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
SSR4-202ENST00000370085 CLDN9O95484 217 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 MLYCDO95822 493 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 PROCP04070 461 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 CPA3P15088 417 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 IMPDH1P20839 514 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 ZNF10P21506 573 aaPredicted RBP13.12□□□□□ -0.31
SSR4-202ENST00000370085 PRKAA2P54646 552 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 TGM3Q08188 693 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 HERC3Q15034 1050 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 TGIF1Q15583 401 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 RBBP7Q16576 425 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 HKDC1Q2TB90 917 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 NKAIN1Q4KMZ8 207 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 C10orf62Q5T681 223 aaPredicted RBP13.12□□□□□ -0.31
SSR4-202ENST00000370085 PRAMEF17Q5VTA0 474 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 C1orf189Q5VU69 101 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 CCDC81Q6ZN84 652 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 TMEM151AQ8N4L1 468 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 CCT6BQ92526 530 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 GBP5Q96PP8 586 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 CENPKQ9BS16 269 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 C1QTNF3Q9BXJ4 246 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
SSR4-202ENST00000370085 ANKHQ9HCJ1 492 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 SSU72Q9NP77 194 aaKnown RBP13.12□□□□□ -0.31
SSR4-202ENST00000370085 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 CROTQ9UKG9 612 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 PLLPQ9Y342 182 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 PCDHGA11Q9Y5H2 935 aa13.12□□□□□ -0.31
SSR4-202ENST00000370085 SRRM3A6NNA2 597 aaPredicted RBP13.11□□□□□ -0.31
SSR4-202ENST00000370085 FOXO6A8MYZ6 492 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 H3BQF6 201 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 TAF4O00268 1085 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 CLEC3AO75596 197 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 WFS1O76024 890 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 SERPINA6P08185 405 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 RPS17P08708 135 aaKnown RBP13.11□□□□□ -0.31
SSR4-202ENST00000370085 RAB40ALP0C0E4 278 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ITGAXP20702 1163 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 TLE3Q04726 772 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 DNASE1L3Q13609 305 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ZNF678Q5SXM1 525 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ARHGAP40Q5TG30 622 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 GRHL2Q6ISB3 625 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ZNF517Q6ZMY9 492 aaPredicted RBP13.11□□□□□ -0.31
SSR4-202ENST00000370085 VN1R4Q7Z5H5 301 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 HOMEZQ8IX15 550 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 SLC38A9Q8NBW4 561 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ZNF740Q8NDX6 193 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 L3HYPDHQ96EM0 354 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 NTMT1Q9BV86 223 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 CHST8Q9H2A9 424 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 ZNF304Q9HCX3 659 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 NXT1Q9UKK6 140 aaKnown RBP13.11□□□□□ -0.31
SSR4-202ENST00000370085 ASB1Q9Y576 335 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
SSR4-202ENST00000370085 EPG5Q9HCE0 2579 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 LOC101059948A0A1B0GTJ6 334 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 ZNF891A8MT65 544 aaPredicted RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 H0YIG0 161 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 P2RX6O15547 441 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 SPAG7O75391 227 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 ALBP02768 609 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms