RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 ZNF304Q9HCX3 659 aa17.33■□□□□ 0.36
CHTOP-201ENST00000368686 PTTG3PQ9NZH4 202 aa17.33■□□□□ 0.36
CHTOP-201ENST00000368686 NUDT4Q9NZJ9 180 aa17.33■□□□□ 0.36
CHTOP-201ENST00000368686 SH3BP4Q9P0V3 963 aa17.33■□□□□ 0.36
CHTOP-201ENST00000368686 NLKQ9UBE8 527 aa17.33■□□□□ 0.36
CHTOP-201ENST00000368686 SSR3Q9UNL2 185 aa17.33■□□□□ 0.36
CHTOP-201ENST00000368686 A0A1B0GVM2 712 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 OR7A17O14581 309 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 LYRM1O43325 122 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 SLC2A2P11168 524 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 TAF6P49848 677 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 GBX2P52951 348 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 PCBP2Q15366 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 SLC39A12Q504Y0 691 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 CLVS2Q5SYC1 327 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 PHC2Q8IXK0 858 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 LINC00518Q8N0U6 118 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 ZBTB44Q8NCP5 570 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 UTP15Q8TED0 518 aaKnown RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 GALNT9Q9HCQ5 603 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 VPS9D1Q9Y2B5 631 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 PCDHGB7Q9Y5F8 929 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 MMP2P08253 660 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 ATXN1LP0C7T5 689 aaKnown RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 PTPN6P29350 595 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 S100A3P33764 101 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 TGM4P49221 684 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 ABATP80404 500 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF551Q7Z340 670 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 TLK2Q86UE8 772 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 DACT3Q96B18 629 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 ZBED6CLQ96FA7 236 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 GFM1Q96RP9 751 aaKnown RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 INPP5KQ9BT40 448 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 DIMT1Q9UNQ2 313 aaKnown RBP17.32■□□□□ 0.36
CHTOP-201ENST00000368686 FKBP7Q9Y680 259 aa17.32■□□□□ 0.36
CHTOP-201ENST00000368686 KCNJ13O60928 360 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 VTNP04004 478 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 PIPP12273 146 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ANXA8P13928 327 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 MAN2A2P49641 1150 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 MAXP61244 160 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 DSC2Q02487 901 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 GTF2H2Q13888 395 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 SV2CQ496J9 727 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 IQCCQ4KMZ1 466 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF648Q5T619 568 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 GTF2H2CQ6P1K8 395 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ATP6V1C2Q8NEY4 427 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 CLHC1Q8NHS4 586 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ZSWIM3Q96MP5 696 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 HEXA-AS1Q9H8Q6 139 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ANKRA2Q9H9E1 313 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 FOLH1BQ9HBA9 442 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 NDFIP2Q9NV92 336 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 MGAT4AQ9UM21 535 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ARL5AQ9Y689 179 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 PCDH17O14917 1159 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 MPZL2O60487 215 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 CDRT1O95170 752 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ADRA2AP08913 450 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 WEE1P30291 646 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 SSTR4P31391 388 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 SOX3P41225 446 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 CCT3P49368 545 aaKnown RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 ALDH6A1Q02252 535 aaKnown RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 HNRNPA0Q13151 305 aaKnown RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 DOC2BQ14184 412 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 FLYWCH1Q4VC44 716 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 RAB41Q5JT25 222 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 OVOS1Q6IE37 1185 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 SUSD1Q6UWL2 747 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 RNF165Q6ZSG1 346 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 MILR1Q7Z6M3 343 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 SLC34A3Q8N130 599 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 OR7D4Q8NG98 312 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 OR9Q1Q8NGQ5 310 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 RBPMSQ93062 196 aaKnown RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 TEPSINQ96N21 525 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 LRTM1Q9HBL6 345 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 CUEDC1Q9NWM3 386 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-201ENST00000368686 NDUFB11Q9NX14 153 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 GJD2Q9UKL4 321 aa17.31■□□□□ 0.36
CHTOP-201ENST00000368686 LOC285095A0A1B0GVY8 99 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 WASH4PA8MWX3 477 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 INMT-MINDY4F8WBC2 141 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 CCNB2O95067 398 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 ARIH2O95376 493 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PEX11BO96011 259 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 IL2P60568 153 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PURAQ00577 322 aaKnown RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PTPRCAPQ14761 206 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 USP39Q53GS9 565 aaKnown RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 MANEALQ5VSG8 457 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 BICRALQ6AI39 1079 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 RGMBQ6NW40 437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms