RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OR4D1Q15615 310 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 VWA5B1Q5TIE3 1220 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 FRA10AC1Q70Z53 315 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 CMC1Q7Z7K0 106 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 CTAGE6Q86UF2 777 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 AFAP1L2Q8N4X5 818 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 RBMXL3Q8N7X1 1067 aaKnown RBP17.96■□□□□ 0.47
CKS1B-203ENST00000368439 EGFL8Q99944 293 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 TMEM79Q9BSE2 394 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 C5AR2Q9P296 337 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 A0A1W2PQ72 361 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 IDSB3KWA1 339 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 KIF2AO00139 706 aaPredicted RBP17.95■□□□□ 0.46
CKS1B-203ENST00000368439 OR1F1O43749 312 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 CTAGE8P0CG41 777 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 IL1RNP18510 177 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 GGT5P36269 586 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 KCNC1P48547 511 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 ATP6V0D1P61421 351 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 TUBB8Q3ZCM7 444 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 NXPE4Q6UWF7 544 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 HPS6Q86YV9 775 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 CTAGE4Q8IX94 777 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 ANKRD53Q8N9V6 530 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 MNS1Q8NEH6 495 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 ZCCHC10Q8TBK6 192 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 KIAA1191Q96A73 305 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 C8orf44Q96CB5 159 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 YIPF2Q9BWQ6 316 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 FUT8Q9BYC5 575 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 ZFP69BQ9UJL9 534 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 DYRK1BQ9Y463 629 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 SLC22A7Q9Y694 548 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 RELNP78509 3460 aa17.95■□□□□ 0.46
CKS1B-203ENST00000368439 NCF1BA6NI72 391 aaPredicted RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 NCF1CA8MVU1 366 aaPredicted RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 SGK494L7N484 410 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 SORBS2O94875 1100 aaKnown RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 BMP10O95393 424 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 NCF1P14598 390 aaPredicted RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 AHRP35869 848 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 CD97P48960 835 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 EMP2P54851 167 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 FOXK1P85037 733 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 PWP1Q13610 501 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 GLE1Q53GS7 698 aaKnown RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 CDKL4Q5MAI5 379 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 IGFL3Q6UXB1 125 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 Q8NA96 180 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 NT5CQ8TCD5 201 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 ZBTB20Q9HC78 741 aaPredicted RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 G3BP2Q9UN86 482 aaKnown RBP17.94■□□□□ 0.46
CKS1B-203ENST00000368439 KCNE2Q9Y6J6 123 aa17.94■□□□□ 0.46
CKS1B-203ENST00000368439 SHANK1Q9Y566 2161 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 SCN2AQ99250 2005 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 LOC102723996A0A087X1L8 192 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 NDUFS4O43181 175 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 DPM1O60762 260 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 JRKO75564 520 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 WDR47O94967 919 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 ZIC2O95409 532 aaPredicted RBP17.93■□□□□ 0.46
CKS1B-203ENST00000368439 HPP00738 406 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 SLC35G6P0C7Q6 338 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 COX6A1P12074 109 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 ACPPP15309 386 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 VARSP26640 1264 aaKnown RBP17.93■□□□□ 0.46
CKS1B-203ENST00000368439 MLLT10P55197 1068 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 HYAL2Q12891 473 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 SLMAPQ14BN4 828 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 IGFBP7Q16270 282 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 JMJD6Q6NYC1 403 aaPredicted RBP17.93■□□□□ 0.46
CKS1B-203ENST00000368439 TMEM205Q6UW68 189 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 SLCO4C1Q6ZQN7 724 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 TMPRSS11BQ86T26 416 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 ISCA2Q86U28 154 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 GPSM1Q86YR5 675 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 PDPRQ8NCN5 879 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 OR51Q1Q8NH59 317 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 MIB2Q96AX9 1013 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 AICDAQ9GZX7 198 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 CDC42EP4Q9H3Q1 356 aaKnown RBP17.93■□□□□ 0.46
CKS1B-203ENST00000368439 ACSS3Q9H6R3 686 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 ANKHQ9HCJ1 492 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 IGSF5Q9NSI5 407 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 PTBP2Q9UKA9 531 aaKnown RBP17.93■□□□□ 0.46
CKS1B-203ENST00000368439 NAALAD2Q9Y3Q0 740 aa17.93■□□□□ 0.46
CKS1B-203ENST00000368439 MAP2K7O14733 419 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 PRAMEF4O60810 478 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 KLHL18O94889 574 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 HEXBP07686 556 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 ITGA3P26006 1051 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 CRABP2P29373 138 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 FBXO48Q5FWF7 155 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 PRAMEF9Q5VWM5 478 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 SLC6A19Q695T7 634 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 SULT1C3Q6IMI6 304 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 PARP9Q8IXQ6 854 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 TCAIMQ8N3R3 496 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 KIF18AQ8NI77 898 aa17.92■□□□□ 0.46
CKS1B-203ENST00000368439 CREB3L4Q8TEY5 395 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms