RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SLC30A8Q8IWU4 369 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 ZDHHC1Q8WTX9 485 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
SYNE1-204ENST00000367248 ZNF778Q96MU6 729 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 KLF16Q9BXK1 252 aaPredicted RBP11.21□□□□□ -0.61
SYNE1-204ENST00000367248 OR51V1Q9H2C8 321 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 FAM120CQ9NX05 1096 aaKnown RBP11.21□□□□□ -0.61
SYNE1-204ENST00000367248 ASNA1O43681 348 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 HHEXQ03014 270 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 MAPK11Q15759 364 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 GALNT10Q86SR1 603 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 CPXM2Q8N436 756 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.61
SYNE1-204ENST00000367248 Q9N2J8 555 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 GLI3P10071 1580 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 CAPN14A8MX76 684 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 CPNE6O95741 557 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 SRYQ05066 204 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
SYNE1-204ENST00000367248 SHISA6Q6ZSJ9 500 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 RHEBL1Q8TAI7 183 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 SYT11Q9BT88 431 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 CMTM6Q9NX76 183 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 HSFX1Q9UBD0 423 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 GIMAP2Q9UG22 337 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 DLGAP4Q9Y2H0 992 aa11.21□□□□□ -0.61
SYNE1-204ENST00000367248 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.61
SYNE1-204ENST00000367248 PRSS51A0A1B0GVH4 220 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 TMCC2O75069 709 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ENGP17813 658 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SLC6A11P48066 632 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 DNAJB13P59910 316 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SIX1Q15475 284 aaPredicted RBP11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SLC44A4Q53GD3 710 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SPANXN4Q5MJ08 99 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 UBAP2Q5T6F2 1119 aaKnown RBP11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF433Q8N7K0 673 aaPredicted RBP11.21□□□□□ -0.62
SYNE1-204ENST00000367248 KCNA7Q96RP8 456 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 MVB12BQ9H7P6 319 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 EHD3Q9NZN3 535 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 USP3Q9Y6I4 520 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SCDO00767 359 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ADRB3P13945 408 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 MYL9P24844 172 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ITGADQ13349 1161 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 KIAA1161Q6NSJ0 714 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 EPGNQ6UW88 154 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 TMPRSS11AQ6ZMR5 421 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 OR9I1Q8NGQ6 314 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ENKURQ8TC29 256 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 GTPBP3Q969Y2 492 aaKnown RBP11.21□□□□□ -0.62
SYNE1-204ENST00000367248 HIST1H2AAQ96QV6 131 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 NELL2Q99435 816 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 TPT1P8Q9HAU6 139 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SLC35C2Q9NQQ7 365 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 CA5BQ9Y2D0 317 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 OLR1P78380 273 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ABATP80404 500 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 ENPP2Q13822 863 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SHKBP1Q8TBC3 707 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 HMG20AQ9NP66 347 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 RARRES3Q9UL19 164 aa11.21□□□□□ -0.62
SYNE1-204ENST00000367248 IDH3BO43837 385 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 APBB3O95704 486 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 C1GALT1C1LP0DN25 315 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 ANXA8P13928 327 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 BPIP17213 487 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 SPINT3P49223 89 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 RBBP4Q09028 425 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 DUOXA1Q1HG43 343 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 SLC2A7Q6PXP3 512 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 KBTBD2Q8IY47 623 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 KLHL6Q8WZ60 621 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 P2RX2Q9UBL9 471 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 FADS2O95864 444 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 MTHFD1P11586 935 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF823P16415 610 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 DRD1P21728 446 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 CD47Q08722 323 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 HTR3DQ70Z44 454 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TSPAN33Q86UF1 283 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 GPAT4Q86UL3 456 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 ZZZ3Q8IYH5 903 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 EID2Q8N6I1 236 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 LRRC58Q96CX6 371 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PLEKHG4BQ96PX9 1271 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 DEFB126Q9BYW3 111 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 MKKSQ9NPJ1 570 aaPredicted RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 COQ9O75208 318 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PGRP06401 933 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 SLC35E2BP0CK96 405 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 FBLP22087 321 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 IVDP26440 423 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 SRP54P61011 504 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms