RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 MED27Q6P2C8 311 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 GPR155Q7Z3F1 870 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 CDC26Q8NHZ8 85 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 COQ10AQ96MF6 247 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 BCL7BQ9BQE9 202 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 WRAP53Q9BUR4 548 aaKnown RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 DUSP26Q9BV47 211 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 PCDHB11Q9Y5F2 797 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 HCFC2Q9Y5Z7 792 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 hCG_2039718K7EN88 272 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 SCAMP2O15127 329 aaKnown RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 XPNPEP2O43895 674 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 JRKO75564 520 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 INMTO95050 263 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 FKBP9O95302 570 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 PBLDP30039 288 aaPredicted RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 GP2P55259 537 aaKnown RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 VLDLRP98155 873 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 IL1RL1Q01638 556 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 ZNF765Q7L2R6 523 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 ZNF554Q86TJ5 538 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 CPA6Q8N4T0 437 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 ZNF514Q96K75 400 aaPredicted RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 OR4K3Q96R72 315 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 BARD1Q99728 777 aaKnown RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 PDP1Q9P0J1 537 aaPredicted RBP16.84■□□□□ 0.29
TRIM11-202ENST00000366699 BTNL2Q9UIR0 455 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 GMPPBQ9Y5P6 360 aa16.84■□□□□ 0.29
TRIM11-202ENST00000366699 DOCK6Q96HP0 2047 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 MGAT4DA6NG13 374 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 ANXA4P09525 319 aaPredicted RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 GALNT18Q6P9A2 607 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 PIWIL3Q7Z3Z3 882 aaKnown RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 ZNF366Q8N895 744 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 TMIEQ8NEW7 156 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 OR7G3Q8NG95 312 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 OR8D1Q8WZ84 308 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 RORBQ92753 470 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 C11orf24Q96F05 449 aaPredicted RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 HSH2DQ96JZ2 352 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 COX4I2Q96KJ9 171 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 DUSP21Q9H596 190 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 SAMHD1Q9Y3Z3 626 aaKnown RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 DYRK1BQ9Y463 629 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 AP1M2Q9Y6Q5 423 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 C1orf105O95561 183 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 POU2F2P09086 479 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 LAMP1P11279 417 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 ITGB7P26010 798 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 CLK3P49761 638 aaKnown RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 FPGSQ05932 587 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 SPCS2Q15005 226 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 LAPTM4AQ15012 233 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 PAGE2BQ5JRK9 111 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 DUS1LQ6P1R4 473 aaKnown RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 CAMKMTQ7Z624 323 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 VTCN1Q7Z7D3 282 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 TSPYL5Q86VY4 417 aaPredicted RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 SYTL1Q8IYJ3 562 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 CLECL1Q8IZS7 167 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 SLC15A4Q8N697 577 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 C1orf52Q8N6N3 182 aaKnown RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 TTC29Q8NA56 475 aaPredicted RBP16.83■□□□□ 0.28
TRIM11-202ENST00000366699 HUS1BQ8NHY5 278 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 FAR1Q8WVX9 515 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 CXorf40BQ96DE9 158 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 PPP1R16AQ96I34 528 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 REEP1Q9H902 201 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 KIF17Q9P2E2 1029 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 PRKAG2Q9UGJ0 569 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 ERVK-11Q9UQG0 969 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
TRIM11-202ENST00000366699 NPC1O15118 1278 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 DPM1O60762 260 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 C1QCP02747 245 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 HNRNPCP07910 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRIM11-202ENST00000366699 CYP4B1P13584 511 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 SLC35A2P78381 396 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 E2F2Q14209 437 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 HIST2H2ACQ16777 129 aaPredicted RBP16.82■□□□□ 0.28
TRIM11-202ENST00000366699 CCSMST1Q4G0I0 132 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 HIST2H2AA3Q6FI13 130 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 B3GNT8Q7Z7M8 397 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 CFAP206Q8IYR0 622 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 SYNPOQ8N3V7 929 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 LILRA3Q8N6C8 439 aaPredicted RBP16.82■□□□□ 0.28
TRIM11-202ENST00000366699 CHTF18Q8WVB6 975 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 NUS1Q96E22 293 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 EFCAB11Q9BUY7 163 aa16.82■□□□□ 0.28
TRIM11-202ENST00000366699 CXXC1Q9P0U4 656 aaPredicted RBP16.82■□□□□ 0.28
TRIM11-202ENST00000366699 NDRG4Q9ULP0 352 aaKnown RBP16.82■□□□□ 0.28
TRIM11-202ENST00000366699 EDDM13A0A1B0GTR0 161 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 DIRAS1O95057 198 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 PDHA2P29803 388 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 ITGA1P56199 1179 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 AQP6Q13520 282 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 NPTX1Q15818 432 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 CTF1Q16619 201 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 FNDC3BQ53EP0 1204 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms