RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 SHMT2P34897 504 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 HSD17B2P37059 387 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 HMGCS1Q01581 520 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 GRAMD1BQ3KR37 738 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 KIAA1614Q5VZ46 1190 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 ZC3H14Q6PJT7 736 aaKnown RBP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 NXPE4Q6UWF7 544 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SPATA24Q86W54 205 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SETD7Q8WTS6 366 aaKnown RBP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SLC35B4Q969S0 331 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 CCDC124Q96CT7 223 aaKnown RBP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SLC45A3Q96JT2 553 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 GTPBP2Q9BX10 602 aaKnown RBP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 TWSG1Q9GZX9 223 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 KLHL25Q9H0H3 589 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 PTTG2Q9NZH5 202 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 GMEB2Q9UKD1 530 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 DYRK1BQ9Y463 629 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 CCL27Q9Y4X3 112 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 ARHGAP33O14559 1287 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SH3BGRLO75368 114 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 C1GALT1C1LP0DN25 315 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 JUPP14923 745 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 FASLGP48023 281 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 LSSP48449 732 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 PRDX1Q06830 199 aaKnown RBP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 E2F2Q14209 437 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SLBPQ14493 270 aaKnown RBP eCLIP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 GGTA1PQ4G0N0 100 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 XKR7Q5GH72 579 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 NXNQ6DKJ4 435 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 C17orf64Q86WR6 236 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 FAM129CQ86XR2 697 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 OR2L3Q8NG85 312 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 WDR20Q8TBZ3 569 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 OR2A14Q96R47 310 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 MTERF1Q99551 399 aaKnown RBP11.74□□□□□ -0.53
CAPN9-203ENST00000366666 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 RAB11FIP5Q9BXF6 653 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 TCF7L2Q9NQB0 619 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 GPRC5BQ9NZH0 403 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 OR6C2Q9NZP2 312 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
CAPN9-203ENST00000366666 C15orf38-AP3S2A0A0A6YYH1 394 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 PIPSLA2A3N6 862 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 TXNDC9O14530 226 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 SORBS2O94875 1100 aaKnown RBP11.73□□□□□ -0.53
CAPN9-203ENST00000366666 EPN2O95208 641 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 HOXD12P35452 270 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 CASP2P42575 452 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 HSPA13P48723 471 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 HPCAP84074 193 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 PCDH1Q08174 1060 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 TCF15Q12870 199 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 DDX39BQ13838 428 aaKnown RBP11.73□□□□□ -0.53
CAPN9-203ENST00000366666 SF1Q15637 639 aaKnown RBP11.73□□□□□ -0.53
CAPN9-203ENST00000366666 C14orf28Q4W4Y0 310 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 LIPJQ5W064 366 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 ATG9BQ674R7 924 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 GRHL2Q6ISB3 625 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 LARP4Q71RC2 724 aaKnown RBP eCLIP11.73□□□□□ -0.53
CAPN9-203ENST00000366666 ARPINQ7Z6K5 226 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 RAB42Q8N4Z0 105 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 ADCY4Q8NFM4 1077 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 OR7G3Q8NG95 312 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 RP9Q8TA86 221 aaKnown RBP11.73□□□□□ -0.53
CAPN9-203ENST00000366666 USP7Q93009 1102 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 YIPF2Q9BWQ6 316 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 ACPTQ9BZG2 426 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 EVA1BQ9NVM1 165 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 PAIP2BQ9ULR5 123 aaKnown RBP11.73□□□□□ -0.53
CAPN9-203ENST00000366666 PCDHB11Q9Y5F2 797 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 RNF215Q9Y6U7 377 aa11.73□□□□□ -0.53
CAPN9-203ENST00000366666 MUC6Q6W4X9 2439 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 GSAPA4D1B5 854 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 LCMT2O60294 686 aaKnown RBP11.72□□□□□ -0.53
CAPN9-203ENST00000366666 ULK1O75385 1050 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 ETHE1O95571 254 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 STATHP02808 62 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 SMIM18P0DKX4 95 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 SLC2A4P14672 509 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 PVRP15151 417 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 UGT2B7P16662 529 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 ENGP17813 658 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 CBX3Q13185 183 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 NKAIN2Q5VXU1 208 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 SATL1Q86VE3 508 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 CPSF7Q8N684 471 aaKnown RBP11.72□□□□□ -0.53
CAPN9-203ENST00000366666 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 HIPK4Q8NE63 616 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 PRSS33Q8NF86 280 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 CEP76Q8TAP6 659 aa11.72□□□□□ -0.53
CAPN9-203ENST00000366666 SELENOMQ8WWX9 145 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms