RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 PCDHGA11Q9Y5H2 935 aa6.5□□□□□ -1.37
RNU1-55P-201ENST00000365510 DNAJC15Q9Y5T4 150 aa6.5□□□□□ -1.37
RNU1-55P-201ENST00000365510 COL5A1P20908 1838 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 KCNE1BA0A087WTH5 132 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 IGHV1OR21-1A0A087WYE8 117 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 IGKV1-8A0A0C4DH67 115 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 EME2A4GXA9 379 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 H7BY64 318 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 MANBAO00462 879 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PIP5K1BO14986 540 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 MAP3K7O43318 606 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 RGS14O43566 566 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SNX3O60493 162 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRAMEF4O60810 478 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 VPS4BO75351 444 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ULK1O75385 1050 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 RASSF9O75901 435 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 GP1BAP07359 652 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 HSD3B1P14060 373 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CD22P20273 847 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 MAGP20916 626 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CDH3P22223 829 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ACP1P24666 158 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 HSD3B2P26439 372 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CSF2RBP32927 897 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ARFIP2P53365 341 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 INHBCP55103 352 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PPP1CAP62136 330 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 RPS15AP62244 130 aaKnown RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CSNK1G2P78368 415 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 BTKQ06187 659 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF33BQ06732 778 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 DDX39BQ13838 428 aaKnown RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CLPPQ16740 277 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 IMPG1Q17R60 797 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SGO1Q5FBB7 561 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 C3orf38Q5JPI3 329 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TCHHL1Q5QJ38 904 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRAMEF9Q5VWM5 478 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 NKAIN2Q5VXU1 208 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF425Q6IV72 752 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CGB2Q6NT52 195 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 WDR74Q6RFH5 385 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TMIGD1Q6UXZ0 262 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ATG14Q6ZNE5 492 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TRIM73Q86UV7 250 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 FAM129CQ86XR2 697 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CARFQ8N187 725 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 GBP7Q8N8V2 638 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 C19orf47Q8N9M1 422 aaKnown RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CCDC197Q8NCU1 140 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 WDR48Q8TAF3 677 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 FLVCR1-AS1Q8TAF5 88 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 IFI44Q8TCB0 444 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF473Q8WTR7 871 aaKnown RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 C10orf82Q8WW14 230 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 NCSTNQ92542 709 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TTC9Q92623 222 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 USP7Q93009 1102 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 RERGQ96A58 199 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 THOC1Q96FV9 657 aaKnown RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SEC16BQ96JE7 1060 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PPP1R36Q96LQ0 422 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRAP1Q96NZ9 151 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TGM7Q96PF1 710 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 DPYSL5Q9BPU6 564 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CCDC3Q9BQI4 270 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 PLCD4Q9BRC7 762 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 CENPKQ9BS16 269 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 DPH7Q9BTV6 452 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TMEM120AQ9BXJ8 343 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ABCG4Q9H172 646 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SYNDIG1Q9H7V2 258 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 MEAF6Q9HAF1 191 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SOHLH2Q9NX45 425 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 EPHA6Q9UF33 1036 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ADGRE2Q9UHX3 823 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF490Q9ULM2 529 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 SATB2Q9UPW6 733 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 BTRCQ9Y297 605 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 TSC22D4Q9Y3Q8 395 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 KLK4Q9Y5K2 254 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 MAST4O15021 2626 aa6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 MN1Q10571 1320 aaPredicted RBP6.49□□□□□ -1.37
RNU1-55P-201ENST00000365510 AHCTF1Q8WYP5 2266 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 TRBC2A0A5B9 178 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 FEZF1A0PJY2 475 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR2A25A4D2G3 310 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 ANKDD1BA6NHY2 528 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLC28A1O00337 649 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 HAT1O14929 419 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR1F1O43749 312 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLC28A2O43868 658 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZBTB11O95625 1053 aaPredicted RBP6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 CPNE6O95741 557 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 PDYNP01213 254 aa6.48□□□□□ -1.37
RNU1-55P-201ENST00000365510 C9P02748 559 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms