RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 GP1BBP13224 206 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 TCF4P15884 667 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 SLC8A3P57103 927 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 IRX4P78413 519 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 ZNF273Q14593 569 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 DUSP5Q16690 384 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 UGCGQ16739 394 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 ATP1A1-AS1Q5TC04 95 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 FAM46CQ5VWP2 391 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 SHEQ5VZ18 495 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 MACC1Q6ZN28 852 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 ABI3BPQ7Z7G0 1075 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 OR2L2Q8NH16 312 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 FAM222BQ8WU58 562 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 NXPE2Q96DL1 559 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 PRICKLE1Q96MT3 831 aaPredicted RBP2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 PI4K2AQ9BTU6 479 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 MTHFD2LQ9H903 347 aaPredicted RBP2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 PHPT1Q9NRX4 125 aaPredicted RBP2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 CHCHD3Q9NX63 227 aaKnown RBP2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 NDE1Q9NXR1 346 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 POMT1Q9Y6A1 747 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 IL16Q14005 1332 aa2.9□□□□□ -1.95
RNU4-1-201ENST00000363925 A0A087WZ39 114 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 MEX3AA1L020 520 aaKnown RBP2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 KRTAP16-1A8MUX0 517 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 A8MXK9 166 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 H7C0S8 307 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 SOCS3O14543 225 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 KRT33AO76009 404 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 HPRP00739 348 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 CAPN2P17655 700 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 LBPP18428 481 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 MFAP3P55082 362 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 CLDN15P56746 228 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 SNAI3Q3KNW1 292 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 C6orf136Q5SQH8 315 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 FAM91A1Q658Y4 838 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 SUSD1Q6UWL2 747 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 PET117Q6UWS5 81 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 GPRIN3Q6ZVF9 776 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 IL17RELQ6ZVW7 336 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 Q71RC1 249 aaPredicted RBP2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 P2RY8Q86VZ1 359 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 OR4N5Q8IXE1 308 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 KLHL7Q8IXQ5 586 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 THNSL1Q8IYQ7 743 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 APCDD1Q8J025 514 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 LYG1Q8N1E2 194 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 PRSS35Q8N3Z0 413 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 C11orf45Q8TAV5 145 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 MIPOL1Q8TD10 442 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 CHPT1Q8WUD6 406 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 CHURC1Q8WUH1 139 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 ST6GALNAC6Q969X2 333 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 RBM41Q96IZ5 413 aaKnown RBP2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 SLC45A3Q96JT2 553 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 GDAP1L1Q96MZ0 367 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 LGMNQ99538 433 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 IL12RB2Q99665 862 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 SOSTQ9BQB4 213 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 PANK3Q9H999 370 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 WIPI2Q9Y4P8 454 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 SMAD5-AS1Q9Y6J3 95 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 ZHX2Q9Y6X8 837 aa2.89□□□□□ -1.95
RNU4-1-201ENST00000363925 LOC105371242A0A075B767 164 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 TRAV34A0A0B4J273 112 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 MPTX1A8MV57 137 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 C2CD4DB7Z1M9 353 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 PRSS46E5RG02 174 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 PGRMC2O15173 223 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 MAGEB2O15479 319 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 KIF5CO60282 957 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 YES1P07947 543 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 GIFP27352 417 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 SHC1P29353 583 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 RBMS1P29558 406 aaKnown RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 GSCP56915 257 aaPredicted RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 BTG1P62324 171 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 ZNF177Q13360 481 aaPredicted RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 NFATC2Q13469 925 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 TNK1Q13470 666 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 MS4A18Q3C1V0 323 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 FAM106AQ4KMX7 169 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 FAM166AQ6J272 317 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 PRSS55Q6UWB4 352 aaPredicted RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 TMEM182Q6ZP80 229 aaPredicted RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 CDHR3Q6ZTQ4 885 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 PRUNE1Q86TP1 453 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 METTL23Q86XA0 190 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 CCDC60Q8IWA6 550 aaPredicted RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 LMNTD2Q8IXW0 634 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 GTF3AQ92664 365 aaKnown RBP2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 RASL10AQ92737 203 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 P2RX5Q93086 422 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 SPATA17Q96L03 361 aa2.88□□□□□ -1.95
RNU4-1-201ENST00000363925 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms