RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SMURF1Q9HCE7 757 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ITM2CQ9NQX7 267 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ASB1Q9Y576 335 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 COCHO43405 550 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 TIGD3Q6B0B8 471 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 MILR1Q7Z6M3 343 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 TCAIMQ8N3R3 496 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 CD200R1Q8TD46 325 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 Q96MT0 163 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 SLC22A4Q9H015 551 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 OR51E2Q9H255 320 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 GIMAP4Q9NUV9 329 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 THUMPD1Q9NXG2 353 aaKnown RBP18.41■□□□□ 0.54
CMTM3-201ENST00000361909 UBA2Q9UBT2 640 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-201ENST00000361909 SLC35F4A4IF30 521 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 C5orf67F2Z3F1 127 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 STX7O15400 261 aaKnown RBP18.41■□□□□ 0.54
CMTM3-201ENST00000361909 SSX4O60224 188 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 IFNA8P32881 189 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 GRK5P34947 590 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 CTNNB1P35222 781 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 ABRQ12979 859 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 CEP78Q5JTW2 689 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 C10orf62Q5T681 223 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-201ENST00000361909 METTL2BQ6P1Q9 378 aaKnown RBP18.41■□□□□ 0.54
CMTM3-201ENST00000361909 RTL10Q7L3V2 364 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 PLCZ1Q86YW0 608 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 TCTE3Q8IZS6 198 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 FAM109AQ8N4B1 249 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 DENND6BQ8NEG7 585 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 CHCHD6Q9BRQ6 235 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 CENPOQ9BU64 300 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 TNKS2Q9H2K2 1166 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 LRTM1Q9HBL6 345 aa18.41■□□□□ 0.54
CMTM3-201ENST00000361909 C21orf33P30042 268 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 C5orf22Q49AR2 442 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 GTDC1Q4AE62 458 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ALG1LQ6GMV1 187 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 FBXL22Q6P050 247 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 EIF3MQ7L2H7 374 aaKnown RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 CPA6Q8N4T0 437 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 DCBLD1Q8N8Z6 715 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 MRPL43Q8N983 215 aaKnown RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ZFAND1Q8TCF1 268 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 GGHQ92820 318 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 SEMA3CQ99985 751 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 TCF25Q9BQ70 676 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 TTYH2Q9BSA4 534 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 MKRN2Q9H000 416 aaKnown RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 TMEM245Q9H330 911 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 RUBCNLQ9H714 662 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 SERHLQ9NQF3 203 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ANAPC1Q9H1A4 1944 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ARHGEF9O43307 516 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 KIAA0513O60268 411 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 F11P03951 625 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 HMBSP08397 361 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 NAT1P18440 290 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 PTX3P26022 381 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 RFX2P48378 723 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 TARDBPQ13148 414 aaKnown RBP eCLIP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ASAH1Q13510 395 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 LAPTM4AQ15012 233 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ZNF767PQ75MW2 155 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 BPHLQ86WA6 291 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 ELMOD2Q8IZ81 293 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 PGBD5Q8N414 524 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 STX19Q8N4C7 294 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 EEF1AKMT1Q8WVE0 214 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 MARVELD3Q96A59 401 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 DMRTB1Q96MA1 342 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 TRNT1Q96Q11 434 aaKnown RBP18.4■□□□□ 0.54
CMTM3-201ENST00000361909 RACGAP1Q9H0H5 632 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 C14orf119Q9NWQ9 140 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 TRPS1Q9UHF7 1281 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 SNX7Q9UNH6 387 aa18.4■□□□□ 0.54
CMTM3-201ENST00000361909 LINC01553A4QN01 128 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 ERVH48-1M5A8F1 160 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 RB1P06400 928 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 EPHA2P29317 976 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 TNFSF8P32971 234 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 S100A3P33764 101 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 SLC19A1P41440 591 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 SLC11A2P49281 568 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 ERVFC1P60507 584 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 SCN1BQ07699 218 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 PCDH1Q08174 1060 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 PTPRCAPQ14761 206 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 TAF1AQ15573 450 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-201ENST00000361909 USP39Q53GS9 565 aaKnown RBP18.39■□□□□ 0.53
CMTM3-201ENST00000361909 GDPGP1Q6ZNW5 385 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 CBLL1Q75N03 491 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 TMEM150AQ86TG1 271 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 ZZZ3Q8IYH5 903 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 CYP4Z2PQ8N1L4 340 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 SIDT2Q8NBJ9 832 aaKnown RBP18.39■□□□□ 0.53
CMTM3-201ENST00000361909 SPPL3Q8TCT6 385 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 ESAMQ96AP7 390 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 EGLN2Q96KS0 407 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 IPPKQ9H8X2 491 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms