RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C11orf24Q96F05 449 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-202ENST00000361545 MARCH4Q9P2E8 410 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-202ENST00000361545 TPD52L2O43399 206 aaKnown RBP17.99■□□□□ 0.47
CLIP2-202ENST00000361545 SCAPQ12770 1279 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 KCNC3Q14003 757 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 FIBINQ8TAL6 211 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 CASD1Q96PB1 797 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 RETREG1Q9H6L5 497 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 KDM3BQ7LBC6 1761 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 DAPL1A0PJW8 107 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 GRXCR1A8MXD5 290 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 PRODHO43272 600 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 CD47Q08722 323 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 FRMD7Q6ZUT3 714 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 PHTF2Q8N3S3 785 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 OR56A1Q8NGH5 318 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 PDE10AQ9Y233 779 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 EI24O14681 340 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 LATO43561 262 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 PRKAR1AP10644 381 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 MATN1P21941 496 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 LEPRP48357 1165 aaKnown RBP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 XKP51811 444 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 TIFABQ6ZNK6 161 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 FAR1Q8WVX9 515 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 SH3YL1Q96HL8 342 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 FARSBQ9NSD9 589 aaKnown RBP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 CENPMQ9NSP4 180 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 UBAP1Q9NZ09 502 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ARHGEF33A8MVX0 844 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ROR2Q01974 943 aaKnown RBP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ZNF846Q147U1 533 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 HERC3Q15034 1050 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 MARCH8Q5T0T0 291 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 NCEH1Q6PIU2 408 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 OR52E4Q8NGH9 312 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 CANT1Q8WVQ1 401 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 GEMIN6Q8WXD5 167 aaKnown RBP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 PTCHD1Q96NR3 888 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 NSUN5Q96P11 429 aaKnown RBP17.98■□□□□ 0.47
CLIP2-202ENST00000361545 GORASP1Q9BQQ3 440 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 HCSTQ9UBK5 93 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 CD207Q9UJ71 328 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 C5AR1P21730 350 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 IL12AP29459 219 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ZNF763Q0D2J5 394 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ZDHHC14Q8IZN3 488 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 C3orf58Q8NDZ4 430 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 NKD1Q969G9 470 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 ZIC5Q96T25 663 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 TRIM39Q9HCM9 518 aa17.98■□□□□ 0.47
CLIP2-202ENST00000361545 TFECO14948 347 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-202ENST00000361545 VEGFDO43915 354 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 ANXA8P13928 327 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 PDX1P52945 283 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 AQP4P55087 323 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 C12orf40Q86WS4 652 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 RAB8BQ92930 207 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 COQ8BQ96D53 544 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 KCNC2Q96PR1 638 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 SEC61A2Q9H9S3 476 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 POPDC3Q9HBV1 291 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 SUSD2Q9UGT4 822 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 HCN2Q9UL51 889 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 CAPN5O15484 640 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-202ENST00000361545 SEMA4FO95754 770 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 H1F0P07305 194 aaKnown RBP17.97■□□□□ 0.47
CLIP2-202ENST00000361545 LINGO3P0C6S8 592 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 CEBPBP17676 345 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 XRCC1P18887 633 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-202ENST00000361545 PTNP21246 168 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 AFF1P51825 1210 aaKnown RBP17.97■□□□□ 0.47
CLIP2-202ENST00000361545 DEFB134Q4QY38 66 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 EPGNQ6UW88 154 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 CCDC116Q8IYX3 515 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 IL22RA1Q8N6P7 574 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 RNF130Q86XS8 419 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 PROKR2Q8NFJ6 384 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 LRCH3Q96II8 777 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 IL4I1Q96RQ9 567 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 SLC17A9Q9BYT1 436 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 FAM120CQ9NX05 1096 aaKnown RBP17.97■□□□□ 0.47
CLIP2-202ENST00000361545 ATXN10Q9UBB4 475 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 COMMD3-BMI1R4GMX3 469 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 PRSS51A0A1B0GVH4 220 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 E7ENX8 843 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 H0YGN5 161 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 S1PR4O95977 384 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 ARSAP15289 507 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 CKMT2P17540 419 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 MAPK14Q16539 360 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 GALNTL5Q7Z4T8 443 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 SCD5Q86SK9 330 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 S100ZQ8WXG8 99 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 TMEM125Q96AQ2 219 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 PRTFDC1Q9NRG1 225 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 DIRAS1O95057 198 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 FUT4P22083 530 aa17.97■□□□□ 0.47
CLIP2-202ENST00000361545 SLC6A9P48067 706 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms