RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KIAA1161Q6NSJ0 714 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 SNX20Q7Z614 316 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 CNTN4Q8IWV2 1026 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 DPH2Q9BQC3 489 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 GORASP2Q9H8Y8 452 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 ENAMQ9NRM1 1142 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 A0A1B0GVM2 712 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM86C2PA6NEL3 165 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 ARL5CA6NH57 179 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 CLDN24A6NM45 220 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 KCNE1P15382 129 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 TGFBR2P37173 567 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 NRARPQ7Z6K4 114 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 ASB15Q8WXK1 588 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 DHRS1Q96LJ7 313 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 UHRF1Q96T88 793 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 RAD18Q9NS91 495 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 A0A1W2PRB8 838 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 ANKRD66B4E2M5 251 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 CTDSP2O14595 271 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 TEX28O15482 410 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM163BP0C2L3 166 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 MAGEA12P43365 314 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 CREMQ03060 361 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 DUSP4Q13115 394 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 CMTM7Q96FZ5 175 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 DOHHQ9BU89 302 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.074e-7■■■■□ 22.5
CLSTN1-201ENST00000361311 MAT2BQ9NZL9 334 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 SOBPA7XYQ1 873 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 M0R233 179 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 CPNE6O95741 557 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 ANXA3P12429 323 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 RPS24P62847 133 aaKnown RBP15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM189BP81408 668 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 ARHGAP1Q07960 439 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 LINC00299Q6ZSB3 139 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 LYSMD2Q8IV50 215 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 VMP1Q96GC9 406 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 TSSK6Q9BXA6 273 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 MED11Q9P086 117 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 FCF1Q9Y324 198 aaKnown RBP15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 H7C0S8 307 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 HAPLN1P10915 354 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 CORO1AP31146 461 aaKnown RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 PPP3R1P63098 170 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 ATXN7L2Q5T6C5 722 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 TICAM1Q8IUC6 712 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 NPAS3Q8IXF0 933 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 KLHL36Q8N4N3 616 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM83FQ8NEG4 500 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 EXOSC8Q96B26 276 aaKnown RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 BEX1Q9HBH7 125 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 IGKV6-21A0A0C4DH24 114 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 REM1O75628 298 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 LRG1P02750 347 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 EXOC3L2Q2M3D2 409 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 CYP27C1Q4G0S4 372 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 C1QTNF12Q5T7M4 302 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 TBPL2Q6SJ96 375 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 GPRIN1Q7Z2K8 1008 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 CELF2-AS1Q8N7Q2 184 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 PROKR1Q8TCW9 393 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 RANBP3Q9H6Z4 567 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 L7N2F9 121 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 HSPB3Q12988 150 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 PTCHD3Q3KNS1 767 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 OR5H6Q8NGV6 325 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 DPCDQ9BVM2 203 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 ABCD2Q9UBJ2 740 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 SPACA6W5XKT8 324 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 IGKV6D-21A0A0A0MT36 114 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 OR2AG2A6NM03 316 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 ARNTLO00327 626 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 KPNA3O00505 521 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 OMPP47874 163 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 INAVAQ3KP66 663 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 LETMD1Q6P1Q0 360 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 LRRC70Q7Z2Q7 622 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 GON7Q9BXV9 100 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 UBQLN2Q9UHD9 624 aa15.47■□□□□ 0.07
CLSTN1-201ENST00000361311 UBR2Q8IWV8 1755 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 ITGAMP11215 1152 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 DSTNP60981 165 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 PRKCDQ05655 676 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 SERINC3Q13530 473 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 SELPLGQ14242 412 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 CLEC12AQ5QGZ9 265 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 GDPD1Q8N9F7 314 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 LSM14AQ8ND56 463 aaKnown RBP15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 DENND6BQ8NEG7 585 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 NLGN2Q8NFZ4 835 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 OR10H4Q8NGA5 316 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 A0A1W2PQL4 384 aaPredicted RBP15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 PIM1P11309 404 aaPredicted RBP15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 DNASE1P24855 282 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 MAGEA2P43356 314 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms