RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NTN4Q9HB63 628 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 TBC1D23Q9NUY8 699 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 SMPD3Q9NY59 655 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-202ENST00000360642 A0A1W2PPL8 197 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 H0Y858 1186 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 UPK1AO00322 258 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 TRMUO75648 421 aaKnown RBP7.09□□□□□ -1.27
CLCN3-202ENST00000360642 CDH1P12830 882 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 DGKAP23743 735 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 HNF1BP35680 557 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 RPS9P46781 194 aaKnown RBP7.09□□□□□ -1.27
CLCN3-202ENST00000360642 PHKG1Q16816 387 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 LYPLAL1Q5VWZ2 237 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 TBPL2Q6SJ96 375 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.09□□□□□ -1.272e-8■■□□□ 13
CLCN3-202ENST00000360642 RALGPS2Q86X27 583 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-202ENST00000360642 CLDN19Q8N6F1 224 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 TNIP2Q8NFZ5 429 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 OR1N1Q8NGS0 311 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 RHBDF1Q96CC6 855 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 DTNBP1Q96EV8 351 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 PPP3R2Q96LZ3 170 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF583Q96ND8 569 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 CCDC115Q96NT0 180 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 NTMT1Q9BV86 223 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 TM6SF2Q9BZW4 377 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 RDH14Q9HBH5 336 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF334Q9HCZ1 680 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-202ENST00000360642 TLR9Q9NR96 1032 aa7.09□□□□□ -1.27
CLCN3-202ENST00000360642 POLR3HQ9Y535 204 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-202ENST00000360642 ANKRD12Q6UB98 2062 aa7.09□□□□□ -1.28
CLCN3-202ENST00000360642 A0A087WXM4 84 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 C1orf232A0A0U1RR37 186 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 PRAMEF4O60810 478 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 TULP3O75386 442 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 CLDN7O95471 211 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 LDLRP01130 860 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GGT1P19440 569 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 CAPGP40121 348 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 RGS4P49798 205 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 DGKQP52824 942 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 MTPNP58546 118 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ADARB1P78563 741 aaKnown RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 CD69Q07108 199 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 CDH18Q13634 790 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 TAF12Q16514 161 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 SULT1C3Q6IMI6 304 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 PATL1Q86TB9 770 aaKnown RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ERI1Q8IV48 349 aaKnown RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ZBTB2Q8N680 514 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 OR6K2Q8NGY2 324 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 OSCP1Q8WVF1 389 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 APIPQ96GX9 242 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 FBXL20Q96IG2 436 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 PPM1MQ96MI6 270 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 LYSMD1Q96S90 227 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GORASP2Q9H8Y8 452 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 RC3H2Q9HBD1 1191 aaKnown RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 DDX18Q9NVP1 670 aaKnown RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ASIC5Q9NY37 505 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 USP36Q9P275 1121 aaKnown RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 USP34Q70CQ2 3546 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GLYATL1P3A0A0U1RQE8 302 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 SOCS5O75159 536 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 WDR47O94967 919 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GUCA1CO95843 209 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ITGB6P18564 788 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ITGALP20701 1170 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 UGT1A1P22309 533 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 UGT1A4P22310 534 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 UGT1A3P35503 534 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 UGT1A5P35504 534 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 MC3RP41968 323 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GDF5P43026 501 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 BCL2L1Q07817 233 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 VEPH1Q14D04 833 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GPR33Q49SQ1 333 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 RETSATQ6NUM9 610 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 TTC33Q6PID6 262 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ZSWIM9Q86XI8 627 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF786Q8N393 782 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ARL14EPQ8N8R7 260 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 MAGEE2Q8TD90 523 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 GTF2H4Q92759 462 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 LIN37Q96GY3 246 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 NSMCE2Q96MF7 247 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 SEPHS2Q99611 448 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 MYOCQ99972 504 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 FAM83CQ9BQN1 747 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 HTATIP2Q9BUP3 242 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 BDH2Q9BUT1 245 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 VAPAQ9P0L0 249 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 FADS3Q9Y5Q0 445 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 OBSL1O75147 1896 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 PRRT4C9JH25 899 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 H0YAE9 185 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 K7EPI3 171 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF701M0R085 212 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-202ENST00000360642 SLC28A1O00337 649 aa7.08□□□□□ -1.28
CLCN3-202ENST00000360642 CLOCKO15516 846 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms