RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 SFXN1Q9H9B4 322 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 USP29Q9HBJ7 922 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 COL14A1Q05707 1796 aaKnown RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 GPIP06744 558 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 MRPL3P09001 348 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 FOSL2P15408 326 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ZNF30P17039 623 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 IQCCQ4KMZ1 466 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 AGTRAPQ6RW13 159 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ASB18Q6ZVZ8 466 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 NIPA2Q8N8Q9 360 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 OR5K1Q8NHB7 308 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 NTPCRQ9BSD7 190 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 TMEM248Q9NWD8 314 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ATXN10Q9UBB4 475 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 FBLP22087 321 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 PDCD4Q53EL6 469 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 BICRALQ6AI39 1079 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ERN2Q76MJ5 926 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 RAB8BQ92930 207 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 DMRTB1Q96MA1 342 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 EFCAB11Q9BUY7 163 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 POLR2J2Q9GZM3 115 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 OXSMQ9NWU1 459 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 PDLIM1O00151 329 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 VILLO15195 856 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 RPS21P63220 83 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 BNIP1Q12981 228 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 SNTA1Q13424 505 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 DSC3Q14574 896 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ARL9Q6T311 187 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 TMIGD1Q6UXZ0 262 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ZNF639Q9UID6 485 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ZSCAN5BA6NJL1 495 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 BEST1O76090 585 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 OTX2P32243 289 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 NUDT6P53370 316 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 MFSD5Q6N075 450 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 CCDC116Q8IYX3 515 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 MSLNLQ96KJ4 702 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 CITED4Q96RK1 184 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 FAM129BQ96TA1 746 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 OR1A2Q9Y585 309 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 F2P00734 622 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 ZNF782Q6ZMW2 699 aaPredicted RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 YTHDF3Q7Z739 585 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 TMEM110Q86TL2 294 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 GLB1L3Q8NCI6 653 aaPredicted RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 POP5Q969H6 163 aaKnown RBP16.59■□□□□ 0.25
COL4A2-201ENST00000360467 PEBP4Q96S96 227 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 POU2F3Q9UKI9 436 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
COL4A2-201ENST00000360467 CHP2O43745 196 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 PSKH1P11801 424 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 KLHL22Q53GT1 634 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 FAM69BQ5VUD6 431 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 AQP11Q8NBQ7 271 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 LRRC58Q96CX6 371 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 TMEM74Q96NL1 305 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 PRTFDC1Q9NRG1 225 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 RAB26Q9ULW5 256 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 SYNGR4O95473 234 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 IQCF3P0C7M6 154 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 ENTPD1P49961 510 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.25
COL4A2-201ENST00000360467 OR8K3Q8NH51 312 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 OR52B2Q96RD2 323 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 IL23AQ9NPF7 189 aa16.58■□□□□ 0.25
COL4A2-201ENST00000360467 FARSAQ9Y285 508 aaKnown RBP16.58■□□□□ 0.25
COL4A2-201ENST00000360467 C2orf74A8MZ97 194 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 G6PDP11413 515 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 SLC39A5Q6ZMH5 540 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 FAM124BQ9H5Z6 455 aaPredicted RBP16.58■□□□□ 0.24
COL4A2-201ENST00000360467 NSUN3Q9H649 340 aaKnown RBP16.58■□□□□ 0.24
COL4A2-201ENST00000360467 FABP12A6NFH5 140 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 OR1E2P47887 323 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 VEGFBP49765 207 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 SNU13P55769 128 aaKnown RBP16.58■□□□□ 0.24
COL4A2-201ENST00000360467 TICAM1Q8IUC6 712 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 OR4K1Q8NGD4 311 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 TRNAU1APQ9NX07 287 aaKnown RBP16.58■□□□□ 0.24
COL4A2-201ENST00000360467 PXNP49023 591 aaPredicted RBP16.58■□□□□ 0.24
COL4A2-201ENST00000360467 C4orf46Q504U0 113 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 GPRIN1Q7Z2K8 1008 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 METTL8Q9H825 291 aaKnown RBP16.58■□□□□ 0.24
COL4A2-201ENST00000360467 PCDHGB7Q9Y5F8 929 aa16.58■□□□□ 0.24
COL4A2-201ENST00000360467 TSPAN6O43657 245 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 CBSLP0DN79 551 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 CBSP35520 551 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 AP3S2P59780 193 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 TESCQ96BS2 214 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 PRR11Q96HE9 360 aaPredicted RBP16.57■□□□□ 0.24
COL4A2-201ENST00000360467 IL17FQ96PD4 163 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 TRMUO75648 421 aaKnown RBP16.57■□□□□ 0.24
COL4A2-201ENST00000360467 KCNE1P15382 129 aa16.57■□□□□ 0.24
COL4A2-201ENST00000360467 AOC1P19801 751 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms