RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 KIAA0895LQ68EN5 471 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 TTC33Q6PID6 262 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 THOC6Q86W42 341 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 IFNEQ86WN2 208 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 EPHX4Q8IUS5 362 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 OR56A3Q8NH54 315 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 TMEM125Q96AQ2 219 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 COX14Q96I36 57 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 FBXL20Q96IG2 436 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 IER2Q9BTL4 223 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 ACPTQ9BZG2 426 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 SOX17Q9H6I2 414 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 CLK4Q9HAZ1 481 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 CMTM6Q9NX76 183 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 FAM8A1Q9UBU6 413 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 GPC6Q9Y625 555 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 V9GYQ6 96 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 FAM86C2PA6NEL3 165 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 LATO43561 262 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 NDUFS2O75306 463 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 PRPS2P11908 318 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 ITPKAP23677 461 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 EEFSECP57772 596 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 RPL6Q02878 288 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 CHIT1Q13231 466 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 KIAA0040Q15053 153 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 TRAPPC5Q8IUR0 188 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 CFAP206Q8IYR0 622 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 LILRA3Q8N6C8 439 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 TMCO5AQ8N6Q1 288 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 GOLM1Q8NBJ4 401 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 EFHD1Q9BUP0 239 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 ANKRD60Q9BZ19 345 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 TRIM15Q9C019 465 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 DPEP2Q9H4A9 486 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 WDR26Q9H7D7 661 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 GULP1Q9UBP9 304 aa13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 PCYT1BQ9Y5K3 369 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-201ENST00000359867 C1orf105O95561 183 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MTHFD1P11586 935 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MYCLP1P12525 358 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 HNRNPA2B1P22626 353 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MAOBP27338 520 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MAPK1P28482 360 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 PDHA2P29803 388 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 PBLDP30039 288 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 IRF8Q02556 426 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 CSTF1Q05048 431 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 SRSF5Q13243 272 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 DEPDC1Q5TB30 811 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 GPR141Q7Z602 305 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 OR2L2Q8NH16 312 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 HM13Q8TCT9 377 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 C12orf43Q96C57 262 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 COX4I2Q96KJ9 171 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 PKP4Q99569 1192 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 C1QTNF7Q9BXJ2 289 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 DPY30Q9C005 99 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 PRMT8Q9NR22 394 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 INTS7Q9NVH2 962 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 PRKAB1Q9Y478 270 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 RNF103-CHMP3A0A140T963 221 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 AQP12BA6NM10 295 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 C10orf142B7Z368 130 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 DLGAP1O14490 977 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 HNF4AP41235 474 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 EIF2B2P49770 351 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 INAQ16352 499 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 USP39Q53GS9 565 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MAMSTRQ6ZN01 415 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 CHST15Q7LFX5 561 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 ERMP1Q7Z2K6 904 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 HID1Q8IV36 788 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 AQP12AQ8IXF9 295 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 TMEFF1Q8IYR6 380 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 LIX1Q8N485 282 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 STARD8Q92502 1023 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 TFAP2CQ92754 450 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 GFM2Q969S9 779 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 ISOC1Q96CN7 298 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MTFMTQ96DP5 389 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 TRNAU1APQ9NX07 287 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 GPRC5BQ9NZH0 403 aa13.35□□□□□ -0.27
CSNK1E-201ENST00000359867 MGAT4DA6NG13 374 aa13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 PRAMEF4O60810 478 aa13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 IL6P05231 212 aa13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 ZNF8P17098 575 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 IMPA1P29218 277 aa13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 TRIM23P36406 574 aa13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 CASP2P42575 452 aa13.34□□□□□ -0.27
CSNK1E-201ENST00000359867 BDKRB1P46663 353 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms