RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SPPL2CQ8IUH8 684 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 RASGRP3Q8IV61 690 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 PHACTR4Q8IZ21 702 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 CLEC4FQ8N1N0 589 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 ANGPTL6Q8NI99 470 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 TFGQ92734 400 aaPredicted RBP4.9□□□□□ -1.62
ATXN3-202ENST00000359366 USP7Q93009 1102 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 RAB7BQ96AH8 199 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 NRBF2Q96F24 287 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 PDXPQ96GD0 296 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 CCDC138Q96M89 665 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 FRG2BQ96QU4 278 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 GABRG3Q99928 467 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 INPP5KQ9BT40 448 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 BRINP2Q9C0B6 783 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 SEMA6AQ9H2E6 1030 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 COPS7BQ9H9Q2 264 aaPredicted RBP4.9□□□□□ -1.62
ATXN3-202ENST00000359366 FGF22Q9HCT0 170 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 SPAG4Q9NPE6 437 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 PRDM6Q9NQX0 595 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 CUEDC1Q9NWM3 386 aaPredicted RBP4.9□□□□□ -1.62
ATXN3-202ENST00000359366 C1orf109Q9NX04 203 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 STX18Q9P2W9 335 aaKnown RBP4.9□□□□□ -1.62
ATXN3-202ENST00000359366 TRPS1Q9UHF7 1281 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 PPT2Q9UMR5 302 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 FANCMQ8IYD8 2048 aa4.9□□□□□ -1.62
ATXN3-202ENST00000359366 MDC1Q14676 2089 aaKnown RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 A0A1W2PP18 115 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 PDZK1P1A8MUH7 402 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TRIM38O00635 465 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 SLC16A5O15375 505 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 MBTPS2O43462 519 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 VPS4BO75351 444 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TGFB1P01137 390 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 GABRG2P18507 467 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 SDC1P18827 310 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 PRKAR1BP31321 381 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 HNF4AP41235 474 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 GRIA3P42263 894 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 ATP4BP51164 291 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TPMTP51580 245 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 CASP9P55211 416 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 RPS13P62277 151 aaKnown RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 CDKL1Q00532 357 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 CLCA4Q14CN2 919 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 KIAA0040Q15053 153 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TRIP10Q15642 601 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 MLF2Q15773 248 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 LIN52Q52LA3 116 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 NANOGP8Q6NSW7 305 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 EFL1Q7Z2Z2 1120 aaKnown RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TRIM46Q7Z4K8 759 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 PATL1Q86TB9 770 aaKnown RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 HORMAD1Q86X24 394 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 ZFAND4Q86XD8 727 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 MMP21Q8N119 569 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 LILRA2Q8N149 483 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 C10orf111Q8N326 155 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 OR7A2PQ8NGA2 310 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 OR10Q1Q8NGQ4 319 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 OR9A1PQ8NGU1 263 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 OR56A3Q8NH54 315 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 HUS1BQ8NHY5 278 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 HM13Q8TCT9 377 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 STON2Q8WXE9 905 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 FAM3CQ92520 227 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 PPP3R2Q96LZ3 170 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 C12orf66Q96MD2 445 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 HHIPQ96QV1 700 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 FERD3LQ96RJ6 166 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 INSM2Q96T92 566 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 SERPINI1Q99574 410 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 C1QTNF2Q9BXJ5 285 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TEX101Q9BY14 249 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TPSD1Q9BZJ3 242 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 DPY30Q9C005 99 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 OR51B5Q9H339 312 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 UBE2ZQ9H832 354 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 NANOGQ9H9S0 305 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 CARS2Q9HA77 564 aaKnown RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 CCDC177Q9NQR7 707 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 NDE1Q9NXR1 346 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 GPRC5BQ9NZH0 403 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 VAPAQ9P0L0 249 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TMEM181Q9P2C4 612 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 EBF1Q9UH73 591 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 TAC3Q9UHF0 121 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 PRPF19Q9UMS4 504 aaKnown RBP4.9□□□□□ -1.63
ATXN3-202ENST00000359366 SNX6Q9UNH7 406 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 NOX1Q9Y5S8 564 aa4.9□□□□□ -1.63
ATXN3-202ENST00000359366 ASXL3Q9C0F0 2248 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 A0A0G2JN53 185 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 FAM234BA2RU67 622 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 FAM149AA5PLN7 773 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 H7BY64 318 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SLC28A1O00337 649 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 QSOX1O00391 747 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CASQ2O14958 399 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms