RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FPGSQ05932 587 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 RAPSNQ13702 412 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 TCEAL5Q5H9L2 206 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 HDAC2Q92769 488 aaKnown RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 BADQ92934 168 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 DUS3LQ96G46 650 aaKnown RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 RHCGQ9UBD6 479 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 PCDHB11Q9Y5F2 797 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ISM1B1AKI9 464 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 C6P13671 934 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 CEBPBP17676 345 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 CDC42P60953 191 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 B4GALNT1Q00973 533 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 MC1RQ01726 317 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 MYBPC3Q14896 1274 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 CASP12Q6UXS9 341 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 P2RY8Q86VZ1 359 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 RNF130Q86XS8 419 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 MRPL43Q8N983 215 aaKnown RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 OR10G2Q8NGC3 310 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ZNF514Q96K75 400 aaPredicted RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 C12orf66Q96MD2 445 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 RAD9AQ99638 391 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 TBX21Q9UL17 535 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 PSME2Q9UL46 239 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 MYO10Q9HD67 2058 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 NINQ8N4C6 2090 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 NYNRINQ9P2P1 1898 aaKnown RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 TRBV5-4A0A0C4DH59 114 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TCRBV5S2A0A599 114 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 SLC31A1O15431 190 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TPST2O60704 377 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 NUDT7P0C024 238 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 C1GALT1C1LP0DN25 315 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CDK4P11802 303 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 MAP2K4P45985 399 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CDK6Q00534 326 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 KCNC3Q14003 757 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 LRRC26Q2I0M4 334 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 C7orf61Q8IZ16 206 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 LGI4Q8N135 537 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CPPED1Q9BRF8 314 aaPredicted RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 COPS4Q9BT78 406 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CCNB1IP1Q9NPC3 277 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CLCA2Q9UQC9 943 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 GREB1Q4ZG55 1949 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 ATG2BQ96BY7 2078 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 GAPDHSO14556 408 aaPredicted RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 KDM1AO60341 852 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 IFNW1P05000 195 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 PFKLP17858 780 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 KELP23276 732 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 BMPR1AP36894 532 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CLCN2P51788 898 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 SEC13P55735 322 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 MED22Q15528 200 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 RGS21Q2M5E4 152 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 PYCR3Q53H96 274 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 CDKL4Q5MAI5 379 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 MTSS1LQ765P7 747 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 GPR149Q86SP6 731 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 DCP2Q8IU60 420 aaKnown RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 NAGSQ8N159 534 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 OR14C36Q8NHC7 312 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 USP7Q93009 1102 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 SLC2A11Q9BYW1 496 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 REEP4Q9H6H4 257 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 EQTNQ9NQ60 294 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 ERVK-18Q9QC07 812 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 SEC14L3Q9UDX4 400 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 ABCG2Q9UNQ0 655 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 ZNF236Q9UL36 1845 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3DA0A087WVF3 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3IA0A087WXS9 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3EA0A087X179 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3KA0A087X1G2 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3FA6NER0 549 aaPredicted RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3LB9A6J9 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 H7BY64 318 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 SLC1A7O00341 560 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 PRMT3O60678 531 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 ATE1O95260 518 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3HP0C7X1 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 PSMD7P51665 324 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 SMU1Q2TAY7 513 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3GQ6DHY5 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3CQ6IPX1 549 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 METTL2BQ6P1Q9 378 aaKnown RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 COMMD6Q7Z4G1 85 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TRIM48Q8IWZ4 208 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TBC1D3Q8IZP1 549 aaPredicted RBP10.78□□□□□ -0.68
SSU72-202ENST00000359060 RAB8BQ92930 207 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 OTUB2Q96DC9 234 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 PRAP1Q96NZ9 151 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 OSBPL10Q9BXB5 764 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 LHPPQ9H008 270 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
SSU72-202ENST00000359060 IL23AQ9NPF7 189 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms