RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 EFCAB7A8K855 629 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 MAGEB17A8MXT2 336 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 TMEM150CB9EJG8 249 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 H3BMH7 237 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 ETHE1O95571 254 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 CSTF2P33240 577 aaKnown RBP eCLIP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 RPS13P62277 151 aaKnown RBP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 PDCD2Q16342 344 aaPredicted RBP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 ZC3H12BQ5HYM0 836 aaKnown RBP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 MAVSQ7Z434 540 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 BMPERQ8N8U9 685 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 OR1L3Q8NH93 324 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 SELENOMQ8WWX9 145 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 CCT6BQ92526 530 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 TM4SF19Q96DZ7 209 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 THOC1Q96FV9 657 aaKnown RBP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 PPP1R36Q96LQ0 422 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 MAGEB10Q96LZ2 347 aaPredicted RBP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 DEPDC7Q96QD5 511 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 OR6C1Q96RD1 312 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 SPRTNQ9H040 489 aaPredicted RBP24.24■■□□□ 1.47
SSBP3-202ENST00000357475 APMAPQ9HDC9 416 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 DMRT3Q9NQL9 472 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 FGF21Q9NSA1 209 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 FGFR1OP2Q9NVK5 253 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 SNX6Q9UNH7 406 aa24.24■■□□□ 1.47
SSBP3-202ENST00000357475 ANKDD1BA6NHY2 528 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 NDUFS4O43181 175 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 VIMP08670 466 aaKnown RBP24.23■■□□□ 1.47
SSBP3-202ENST00000357475 LSP1P33241 339 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 AHRP35869 848 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 SEC24CP53992 1094 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 HYAL2Q12891 473 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 IFT88Q13099 833 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 TARDBPQ13148 414 aaKnown RBP eCLIP24.23■■□□□ 1.471e-6■■■□□ 15.9
SSBP3-202ENST00000357475 PRAMEF17Q5VTA0 474 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 ASPGQ86U10 573 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 CRLF3Q8IUI8 442 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 AGBL5Q8NDL9 886 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 ADAMTS14Q8WXS8 1223 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 UBE2E3Q969T4 207 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 PMEPA1Q969W9 287 aa24.23■■□□□ 1.47
SSBP3-202ENST00000357475 ZNF501Q96CX3 271 aaPredicted RBP24.23■■□□□ 1.47
SSBP3-202ENST00000357475 HGSO14964 777 aaPredicted RBP24.22■■□□□ 1.47
SSBP3-202ENST00000357475 PIP5K1BO14986 540 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 ULK1O75385 1050 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 SNUPNO95149 360 aaKnown RBP24.22■■□□□ 1.47
SSBP3-202ENST00000357475 TGFB1P01137 390 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 KRT6AP02538 564 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 KRT6BP04259 564 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 ITIH1P19827 911 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 HNRNPH1P31943 449 aaKnown RBP24.22■■□□□ 1.47
SSBP3-202ENST00000357475 KRT6CP48668 564 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 FOXM1Q08050 763 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 TUBB3Q13509 450 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 WASHC2DQ5SRD0 308 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 TMTC4Q5T4D3 741 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 CGB2Q6NT52 195 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 WDR75Q8IWA0 830 aaKnown RBP24.22■■□□□ 1.47
SSBP3-202ENST00000357475 CHCHD4Q8N4Q1 142 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 TBC1D19Q8N5T2 526 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 CSNK1A1LQ8N752 337 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 KCT2Q8NC54 265 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 SLC13A3Q8WWT9 602 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 RERGQ96A58 199 aaPredicted RBP24.22■■□□□ 1.47
SSBP3-202ENST00000357475 C3orf30Q96M34 536 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 ZNF285Q96NJ3 590 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 OR51B5Q9H339 312 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 KLHL31Q9H511 634 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 TSC22D4Q9Y3Q8 395 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 LOXL2Q9Y4K0 774 aa24.22■■□□□ 1.47
SSBP3-202ENST00000357475 C4orf51C9J302 202 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 MAP3K7O43318 606 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 MED26O95402 600 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 LINC00032P0C843 101 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 SDHBP21912 280 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 ETV5P41161 510 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 BTKQ06187 659 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 VWA5B1Q5TIE3 1220 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 DTWD1Q8N5C7 304 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 OR2T11Q8NH01 316 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 PIWIL2Q8TC59 973 aaKnown RBP24.21■■□□□ 1.47
SSBP3-202ENST00000357475 REPS1Q96D71 796 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 THAP11Q96EK4 314 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 CTRCQ99895 268 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 MS4A8Q9BY19 250 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 PRM3Q9NNZ6 103 aa24.21■■□□□ 1.47
SSBP3-202ENST00000357475 RUVBL1Q9Y265 456 aaKnown RBP24.21■■□□□ 1.47
SSBP3-202ENST00000357475 MRPS2Q9Y399 296 aaKnown RBP24.21■■□□□ 1.47
SSBP3-202ENST00000357475 SCN3AQ9NY46 2000 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 SAP18O00422 153 aaKnown RBP24.2■■□□□ 1.47
SSBP3-202ENST00000357475 ZNF195O14628 629 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 TIAF1O95411 115 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 MSL3P1P0C860 447 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 HMGCS1Q01581 520 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 SF3A3Q12874 501 aaKnown RBP eCLIP24.2■■□□□ 1.476e-12■■■■■ 79.1
SSBP3-202ENST00000357475 DDIASQ8IXT1 998 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 N4BP2L2Q92802 583 aaPredicted RBP24.2■■□□□ 1.47
SSBP3-202ENST00000357475 LIN37Q96GY3 246 aaPredicted RBP24.2■■□□□ 1.47
SSBP3-202ENST00000357475 F2RL3Q96RI0 385 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms