RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAM170AA1A519 330 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CAPN5O15484 640 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 KDM4BO94953 1096 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CKMT1AP12532 417 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SRPXP78539 464 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ABRAXAS2Q15018 415 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.39□□□□□ -1.397e-7■■■□□ 16.6
VPS13B-202ENST00000357162 LINGO4Q6UY18 593 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CILP2Q8IUL8 1156 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 C2CD4AQ8NCU7 369 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RGMAQ96B86 450 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GAREM1Q9H706 876 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 MYO16Q9Y6X6 1858 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR10H2O60403 315 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ACPPP15309 386 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 RBMS1P29558 406 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 DEFA5Q01523 94 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TRAM2Q15035 370 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PAFAH1B3Q15102 231 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 BLOC1S3Q6QNY0 202 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ARHGAP12Q8IWW6 846 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 LGI4Q8N135 537 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SPATA22Q8NHS9 363 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 BPIFB1Q8TDL5 484 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SMURF1Q9HCE7 757 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 A0A0G2JMP0 313 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CLIC1O00299 241 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PRAMEF2O60811 474 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ZMPSTE24O75844 475 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 NUP54Q7Z3B4 507 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF614Q8N883 585 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR4M2Q8NGB6 313 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR4F6Q8NGB9 312 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ABCG5Q9H222 651 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SMOC2Q9H3U7 446 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 FFAR3O14843 346 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 INSIG1O15503 277 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GPR42O15529 346 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 LGALS2P05162 132 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PITPNBP48739 271 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TUSC3Q13454 348 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 C3orf67Q6ZVT6 689 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CMC1Q7Z7K0 106 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 LRRC56Q8IYG6 542 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR2T33Q8NG76 320 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CELF6Q96J87 481 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 UBBP0CG47 229 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 UBCP0CG48 685 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 LEPRP48357 1165 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 DLX5P56178 289 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 RPS27AP62979 156 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 UBA52P62987 128 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 C9orf57Q5W0N0 161 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF440Q8IYI8 595 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR10H4Q8NGA5 316 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PCDH19Q8TAB3 1148 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 HSPBAP1Q96EW2 488 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 AP1S3Q96PC3 154 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 FEM1AQ9BSK4 669 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 WDR55Q9H6Y2 383 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 FBXW11Q9UKB1 542 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ATG4BQ9Y4P1 393 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SLC1A7O00341 560 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 IL1RNP18510 177 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ARSHQ5FYA8 562 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ARHGAP11AQ6P4F7 1023 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GPR65Q8IYL9 337 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CMTM7Q96FZ5 175 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CYTH4Q9UIA0 394 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PCDHGA4Q9Y5G9 962 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 BLACEA4D250 179 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR6C70A6NIJ9 312 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TP53P04637 393 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ADH1AP07327 375 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CAPN3P20807 821 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ALDH3B2P48448 385 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 MEF2DQ14814 521 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 FRRS1Q6ZNA5 592 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GAREM2Q75VX8 874 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TFAP2DQ7Z6R9 452 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 C11orf96Q7Z7L8 435 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GHDCQ8N2G8 530 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SECISBP2Q96T21 854 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 DHRS4Q9BTZ2 278 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 MINDY3Q9H8M7 445 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SIX2Q9NPC8 291 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ENAMQ9NRM1 1142 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 A0A0D9SG52 128 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CACNB4O00305 520 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PGLSO95336 258 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TNNI3P19429 210 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SOX11P35716 441 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SSR2P43308 183 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 RFPL4BQ6ZWI9 263 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ING5Q8WYH8 240 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 RAD51AP1Q96B01 352 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms