RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ADAP2Q9NPF8 381 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ABCB8Q9NUT2 735 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 DEPDC5O75140 1603 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TEX13DA0A0J9YY54 714 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TCAF2A6NFQ2 919 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CDC7O00311 574 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PIP5K1BO14986 540 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 OR4F21O95013 312 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ATP4BP51164 291 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PON3Q15166 354 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 KIAA1614Q5VZ46 1190 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TMEM156Q8N614 296 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CIDECQ96AQ7 238 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 OTUB2Q96DC9 234 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 NUS1Q96E22 293 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC35A5Q9BS91 424 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 MAF1Q9H063 256 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC7A4O43246 635 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 LAG3P18627 525 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 XRCC1P18887 633 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 IL32P24001 234 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 LRRC32Q14392 662 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ASB15Q8WXK1 588 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 NCSTNQ92542 709 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PNPLA2Q96AD5 504 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 RIMS1Q86UR5 1692 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PPP5CP53041 499 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 HERVK_113P63132 956 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CAP1Q01518 475 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PTGR1Q14914 329 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CHCHD4Q8N4Q1 142 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 GEMIN6Q8WXD5 167 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TMEM209Q96SK2 561 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ERVK-6Q9BXR3 956 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 QPCTLQ9NXS2 382 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TAS2R3Q9NYW6 316 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CEP170BQ9Y4F5 1589 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 A6NHS1 94 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 DISC1C4P0D8 188 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 INMT-MINDY4F8WBC2 141 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 HTRA2O43464 458 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TGFB1P01137 390 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CKMT2P17540 419 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PTNP21246 168 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 RABGGTBP53611 331 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PLEKHN1Q494U1 663 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TSPAN33Q86UF1 283 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TSNAXQ99598 290 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 NELFAQ9H3P2 528 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 FN3KQ9H479 309 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SDHAF3Q9NRP4 125 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 YARS2Q9Y2Z4 477 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 A0A0J9YVX5 310 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 TNFRSF10BO14763 440 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 NFKB2Q00653 900 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 SEMA3AQ14563 771 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 MLIPQ5VWP3 458 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC44A3Q8N4M1 653 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 CPNE2Q96FN4 548 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 CSPG4P5Q96PW8 444 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 HSD17B14Q9BPX1 270 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 FUZQ9BT04 418 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 BLOC1S5-TXNDC5H3BN57 136 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 LRCH4O75427 683 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 TGM6O95932 706 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 MAPK3P27361 379 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 ZNF41P51814 821 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 KIAA0930Q6ICG6 404 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 PLPPR4Q7Z2D5 763 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 FAM156AQ8NDB6 213 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 TMEM184CQ9NVA4 438 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 RUVBL1Q9Y265 456 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 PCDHGB2Q9Y5G2 931 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 CFAP20Q9Y6A4 193 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 PRKYO43930 277 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 RAB36O95755 333 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 IFNA2P01563 188 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 LCLAT1Q6UWP7 414 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 ZNF367Q7RTV3 350 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 SCML4Q8N228 414 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 OR52E4Q8NGH9 312 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 GATAD2BQ8WXI9 593 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 OR2AG1Q9H205 316 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 OR10A4Q9H209 315 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 FZD3Q9NPG1 666 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 CDH10Q9Y6N8 788 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 PEX12O00623 359 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 HLCSP50747 726 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC26A5P58743 744 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 RPA4Q13156 261 aa11.18□□□□□ -0.62
SPTBN1-202ENST00000356805 EPGNQ6UW88 154 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms