RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 MRPS2Q9Y399 296 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 PCDHB3Q9Y5E6 796 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 SDK2Q58EX2 2172 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 LAMA5O15230 3695 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 FITM1A5D6W6 292 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 STMND1H3BQB6 276 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 TM9SF1O15321 606 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 TRIM13O60858 407 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CPNE3O75131 537 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 PCNAP12004 261 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CXCR2P25025 360 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 HNF4AP41235 474 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 PCDH1Q08174 1060 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 GPS2Q13227 327 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 E2F2Q14209 437 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 PAGE2BQ5JRK9 111 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 GRHL2Q6ISB3 625 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 LETMD1Q6P1Q0 360 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 VN1R5Q7Z5H4 357 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 MILR1Q7Z6M3 343 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CCT6BQ92526 530 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 FGF11Q92914 225 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 TM4SF19Q96DZ7 209 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 THAP11Q96EK4 314 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 B3GNT4Q9C0J1 378 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CUTCQ9NTM9 273 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 NDOR1Q9UHB4 597 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 TMEM184BQ9Y519 407 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 IGF2RP11717 2491 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 AHCTF1Q8WYP5 2266 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 UBFD1O14562 309 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 FFAR3O14843 346 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 GPR42O15529 346 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 SH3BGRLO75368 114 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 ZWINTO95229 277 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CLDN9O95484 217 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 DLGAP3O95886 979 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 OTCP00480 354 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 BPGMP07738 259 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 GCGRP47871 477 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 DDX39BQ13838 428 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 HIST2H2ACQ16777 129 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 LIPJQ5W064 366 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 HIST2H2AA3Q6FI13 130 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 LCN10Q6JVE6 187 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 MED27Q6P2C8 311 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 FAM199XQ6PEV8 388 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 C6orf15Q6UXA7 325 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 FRMD7Q6ZUT3 714 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 SYVN1Q86TM6 617 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 L3MBTL4Q8NA19 623 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 TTC29Q8NA56 475 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 OR7G3Q8NG95 312 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 ZCCHC10Q8TBK6 192 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CREB3L4Q8TEY5 395 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 NTMT1Q9BV86 223 aa17.04■□□□□ 0.32
PDLIM7-202ENST00000355841 CFAP47Q6ZTR5 3102 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 OR4F21O95013 312 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 DHRS4L1P0CG22 281 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 AHRP35869 848 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 NEK2P51955 445 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 WDR4P57081 412 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 LCP2Q13094 533 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 LAPTM5Q13571 262 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 SLC9A5Q14940 896 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 ZRSR2Q15696 482 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 ARHGEF39Q8N4T4 335 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 CAMKVQ8NCB2 501 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 MTFMTQ96DP5 389 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 KLHL31Q9H511 634 aa17.03■□□□□ 0.32
PDLIM7-202ENST00000355841 APC2O95996 2303 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 ANKDD1BA6NHY2 528 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 MEN1O00255 615 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 RAD1O60671 282 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 MLYCDO95822 493 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 TBX6O95947 436 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 B3GALT4O96024 378 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 SLC35G6P0C7Q6 338 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 RORAP35398 523 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 PCBP4P57723 403 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 HYAL2Q12891 473 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 GPRIN3Q6ZVF9 776 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 PRSS41Q7RTY9 318 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 DTX1Q86Y01 620 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 NLGN4XQ8N0W4 816 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 CDYL2Q8N8U2 506 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 NLGN4YQ8NFZ3 816 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 ZNF382Q96SR6 550 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 NLNQ9BYT8 704 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 AICDAQ9GZX7 198 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 NT5DC2Q9H857 520 aa17.02■□□□□ 0.32
PDLIM7-202ENST00000355841 TNFRSF12AQ9NP84 129 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms