RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 EXOSC1Q9Y3B2 195 aaKnown RBP14.46□□□□□ -0.09
LMX1B-201ENST00000355497 HLA-DQB2P05538 268 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 FPR1P21462 350 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 GLDCP23378 1020 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 CDH15P55291 814 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 CAV3P56539 151 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 SNTA1Q13424 505 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 HSPA12BQ96MM6 686 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 OR51I1Q9H343 314 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 AGPSO00116 658 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 TLX2O43763 284 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-201ENST00000355497 CLEC3AO75596 197 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 TNFP01375 233 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 MAGEA8P43361 318 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 ODF4Q2M2E3 257 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 C3orf33Q6P1S2 294 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 TMEM68Q96MH6 324 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 ALPK1Q96QP1 1244 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 SLC17A6Q9P2U8 582 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 MAB21L2Q9Y586 359 aa14.46□□□□□ -0.09
LMX1B-201ENST00000355497 LRRN3E7EW58 273 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 MANBAO00462 879 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 PRKCGP05129 697 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 SLC6A6P31641 620 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 BDKRB1P46663 353 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 FAM110CQ1W6H9 321 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 ASTE1Q2TB18 679 aaPredicted RBP14.46□□□□□ -0.1
LMX1B-201ENST00000355497 BTBD16Q32M84 506 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 NIPA2Q8N8Q9 360 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 THRSPQ92748 146 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 FAXDC2Q96IV6 333 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 PHB2Q99623 299 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 LRRN3Q9H3W5 708 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 APOBEC3GQ9HC16 384 aaKnown RBP14.46□□□□□ -0.1
LMX1B-201ENST00000355497 TM9SF3Q9HD45 589 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 LAMP5Q9UJQ1 280 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 PPM1HQ9ULR3 514 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 A0A0J9YVX5 310 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 YJEFN3A6XGL0 299 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 ALG10BQ5I7T1 473 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 SIRPB2Q5JXA9 342 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 CLEC4CQ8WTT0 213 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 TMEM121BQ9BXQ6 578 aaPredicted RBP14.46□□□□□ -0.1
LMX1B-201ENST00000355497 BTBD1Q9H0C5 482 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 OR10A4Q9H209 315 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 SALL4Q9UJQ4 1053 aa14.46□□□□□ -0.1
LMX1B-201ENST00000355497 DLGAP1O14490 977 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 XPNPEP2O43895 674 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 EOMESO95936 686 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 MT-ND5P03915 603 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 PIM1P11309 404 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 GP1BBP13224 206 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF404Q494X3 552 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 SH3PXD2AQ5TCZ1 1133 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 CEACAM20Q6UY09 585 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 SPATC1Q76KD6 591 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 GOLGA7Q7Z5G4 137 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 GALNT11Q8NCW6 608 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 AURKBQ96GD4 344 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 TAC3Q9UHF0 121 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 FBXL3Q9UKT7 428 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 HIF3AQ9Y2N7 669 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 IFT52Q9Y366 437 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 CDH10Q9Y6N8 788 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 NEMP2A6NFY4 417 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 JUNP05412 331 aaKnown RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 ATP1B2P14415 290 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 TLE2Q04725 743 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 OTOP2Q7RTS6 562 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 FAM86B1Q8N7N1 296 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 GNPDA2Q8TDQ7 276 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 CASTOR1Q8WTX7 329 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 MAF1Q9H063 256 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 CRTAC1Q9NQ79 661 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 PPP1R11O60927 126 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 SIX3O95343 332 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 C8AP07357 584 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 ACADVLP49748 655 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 DGKQP52824 942 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 TRIM74Q86UV6 250 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 TRIM73Q86UV7 250 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 COMTD1Q86VU5 262 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 OR4C15Q8NGM1 316 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 OR8S1Q8NH09 359 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 TMEM41AQ96HV5 264 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 HCN2Q9UL51 889 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 H3BSH0 61 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 H7C2Y5 167 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 M0R233 179 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 TMEM63AO94886 807 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 CREB1P16220 341 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 MATN1P21941 496 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 MLLT6P55198 1093 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-201ENST00000355497 MOGQ16653 247 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 GPAT4Q86UL3 456 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 LRRTM4Q86VH4 590 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF280BQ86YH2 543 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 NAT8LQ8N9F0 302 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 KREMEN2Q8NCW0 462 aa14.45□□□□□ -0.1
LMX1B-201ENST00000355497 FAM46DQ8NEK8 389 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms