RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 OR4C15Q8NGM1 316 aa12.5□□□□□ -0.41
RNF220-202ENST00000355387 C9orf43Q8TAL5 461 aaPredicted RBP12.5□□□□□ -0.41
RNF220-202ENST00000355387 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
RNF220-202ENST00000355387 CRELD1Q96HD1 420 aa12.5□□□□□ -0.41
RNF220-202ENST00000355387 RNF6Q9Y252 685 aa12.5□□□□□ -0.41
RNF220-202ENST00000355387 TMEM229AB2RXF0 380 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 CD22P20273 847 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 FSHRP23945 695 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 HOXD10P28358 340 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 GKP32189 559 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 NCS1P62166 190 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 OLR1P78380 273 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 ZNF404Q494X3 552 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 CCDC81Q6ZN84 652 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 ZBTB46Q86UZ6 589 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 NLRP8Q86W28 1048 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 THOC6Q86W42 341 aaKnown RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 VRK3Q8IV63 474 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 P3H2Q8IVL5 708 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 DNAJC22Q8N4W6 341 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 FBXO15Q8NCQ5 510 aaPredicted RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 COPS4Q9BT78 406 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 TMEM38AQ9H6F2 299 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 ZNF334Q9HCZ1 680 aaPredicted RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 ANKMY1Q9P2S6 941 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 ERVK-11Q9UQG0 969 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 LYVE1Q9Y5Y7 322 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 CLCA1A8K7I4 914 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 PRRG1O14668 218 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 RFPL2O75678 378 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 UPK1BO75841 260 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 CYP2A6P11509 494 aaPredicted RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 ITGA2P17301 1181 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 CD70P32970 193 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 RAE1P78406 368 aaKnown RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 PRKCDQ05655 676 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 PDE12Q6L8Q7 609 aaKnown RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 SLC46A3Q7Z3Q1 461 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 SLC30A8Q8IWU4 369 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 ZNF557Q8N988 423 aaPredicted RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 TET1Q8NFU7 2136 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 KBTBD8Q8NFY9 601 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 OR56A3Q8NH54 315 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 MCFD2Q8NI22 146 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 C17orf50Q8WW18 174 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 REPS1Q96D71 796 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 WDR34Q96EX3 536 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 DCSTAMPQ9H295 470 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 MRPL17Q9NRX2 175 aaKnown RBP12.49□□□□□ -0.41
RNF220-202ENST00000355387 SPATA7Q9P0W8 599 aa12.49□□□□□ -0.41
RNF220-202ENST00000355387 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 SGTAO43765 313 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 LAMP1P11279 417 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 IDSP22304 550 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 ETV6P41212 452 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 CTSKP43235 329 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 ZNF45Q02386 682 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 KRR1Q13601 381 aaKnown RBP12.48□□□□□ -0.41
RNF220-202ENST00000355387 IRF3Q14653 427 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 XKR6Q5GH73 641 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 BRAT1Q6PJG6 821 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 CADM3Q8N126 398 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 OR10Q1Q8NGQ4 319 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 EBPLQ9BY08 206 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 PLK4O00444 970 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 GRM6O15303 877 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
RNF220-202ENST00000355387 GABRB1P18505 474 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 FUT4P22083 530 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 CAP1Q01518 475 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 DOC2AQ14183 400 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 SMN1Q16637 294 aaKnown RBP12.48□□□□□ -0.41
RNF220-202ENST00000355387 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 CLECL1Q8IZS7 167 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 AMER2Q8N7J2 671 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 COL21A1Q96P44 957 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 RMI1Q9H9A7 625 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 GABRR3A8MPY1 467 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 TOR1BO14657 336 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 YY2O15391 372 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 AIREO43918 545 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 S100A1P23297 94 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 ITPKAP23677 461 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 EPHA2P29317 976 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 RRM2P31350 389 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 TIA1P31483 386 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF220-202ENST00000355387 IL1RL1Q01638 556 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 SP3Q02447 781 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 IFI44LQ53G44 452 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 ARMC8Q8IUR7 673 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 RAVER1Q8IY67 606 aaKnown RBP12.48□□□□□ -0.41
RNF220-202ENST00000355387 ELMO1Q92556 727 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms