RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 VEGFCP49767 419 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 TRIM16LQ309B1 348 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CPZQ66K79 652 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 SEL1L3Q68CR1 1132 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 OR4F3Q6IEY1 312 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 BNC2Q6ZN30 1099 aaPredicted RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 ARL14EPQ8N8R7 260 aaPredicted RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 PLA2G15Q8NCC3 412 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 OR13C5Q8NGS8 318 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 RNF166Q96A37 237 aaPredicted RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 FAM83CQ9BQN1 747 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PAK5Q9P286 719 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 STAB2Q8WWQ8 2551 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 MRASO14807 208 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 HSPA4LO95757 839 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 LSM8O95777 96 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 MT-ND2P03891 347 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 TP53P04637 393 aaPredicted RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 FAM200BP0CF97 657 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PRKAA2P54646 552 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 RAB10P61026 200 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 MERTKQ12866 999 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 DDX39BQ13838 428 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 CYP51A1Q16850 503 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 TMEM132AQ24JP5 1023 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 LIPMQ5VYY2 423 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 WDR88Q6ZMY6 472 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ZNF438Q7Z4V0 828 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ARHGAP22Q7Z5H3 698 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 NAGSQ8N159 534 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CPSF7Q8N684 471 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 OR5D16Q8NGK9 328 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 BPIFB1Q8TDL5 484 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PIH1D2Q8WWB5 315 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 C19orf60Q96EN9 201 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 LMLNQ96KR4 655 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 DMRTB1Q96MA1 342 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 IL4I1Q96RQ9 567 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 TM9SF2Q99805 663 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ZNF717Q9BY31 904 aaPredicted RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 ROGDIQ9GZN7 287 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 EHD1Q9H4M9 534 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 MRPL40Q9NQ50 206 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 OBP2AQ9NY56 170 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PCDHB7Q9Y5E2 793 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 FADS3Q9Y5Q0 445 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PRRT4C9JH25 899 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 FCMRO60667 390 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 SULT1C4O75897 302 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 SLC16A8O95907 504 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 C8BP07358 591 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 MSL3P1P0C860 447 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 OR1D2P34982 312 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 HBA1P69905 142 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 FOXK1P85037 733 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 BST2Q10589 180 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 FUT5Q11128 374 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PDAP1Q13442 181 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 GRAMD4Q6IC98 578 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 GCNT7Q6ZNI0 430 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 WDR5BQ86VZ2 330 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 FAR2Q96K12 515 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CNDP1Q96KN2 507 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ZNF649Q9BS31 505 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 C1orf21Q9H246 121 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 STOML1Q9UBI4 398 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CCDC163A0A0D9SF12 145 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CBX4O00257 560 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 GFRA3O60609 400 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 STC2O76061 302 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CALB1P05937 261 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 KRT20P35900 424 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ARHGDIBP52566 201 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ITGADQ13349 1161 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 NFE2L1Q14494 772 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PON2Q15165 354 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 C2orf68Q2NKX9 166 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ZC3H14Q6PJT7 736 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 CEACAM20Q6UY09 585 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 ZBTB49Q6ZSB9 765 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CRLF3Q8IUI8 442 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 CNTN4Q8IWV2 1026 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 BBS7Q8IWZ6 715 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 BBS1Q8NFJ9 593 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 TUBGCP3Q96CW5 907 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 WBP1Q96G27 269 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PLEKHA8Q96JA3 519 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 HHIPQ96QV1 700 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 SLC6A16Q9GZN6 736 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 KAT8Q9H7Z6 458 aaKnown RBP5.39□□□□□ -1.55
CD47-201ENST00000355354 IPPKQ9H8X2 491 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 PLEKHA5Q9HAU0 1116 aa5.39□□□□□ -1.55
CD47-201ENST00000355354 H0YCG3 227 aa5.38□□□□□ -1.55
CD47-201ENST00000355354 NDUFS2O75306 463 aa5.38□□□□□ -1.55
CD47-201ENST00000355354 KLHL2O95198 593 aa5.38□□□□□ -1.55
CD47-201ENST00000355354 STSP08842 583 aa5.38□□□□□ -1.55
CD47-201ENST00000355354 MYF5P13349 255 aa5.38□□□□□ -1.55
CD47-201ENST00000355354 PRG2P13727 222 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms