RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MSX2P35548 267 aaPredicted RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 AHRP35869 848 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 FKBP9P1Q75LS8 142 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 FLVCR1-AS1Q8TAF5 88 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 CREB3L4Q8TEY5 395 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 LRGUKQ96M69 825 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ZNF570Q96NI8 536 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 KLHL4Q9C0H6 718 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 REEP4Q9H6H4 257 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 KHDRBS2Q5VWX1 349 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 Q6ZSR6 202 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 SERPINA11Q86U17 422 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ADHFE1Q8IWW8 467 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 SLC22A18ASQ8N1D0 253 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ANKFN1Q8N957 763 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 CADM4Q8NFZ8 388 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 TOE1Q96GM8 510 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 GUCD1Q96NT3 240 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 BTBD9Q96Q07 612 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ECSITQ9BQ95 431 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 EFHD1Q9BUP0 239 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 CUEDC1Q9NWM3 386 aaPredicted RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ZNF624Q9P2J8 865 aaPredicted RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 CFAP20Q9Y6A4 193 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ATG2BQ96BY7 2078 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 KRBA1A5PL33 1030 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 HNRNPRO43390 633 aaKnown RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 TNFSF14O43557 240 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 TNFP01375 233 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 BMP2P12643 396 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 F3P13726 295 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 TCN1P20061 433 aaPredicted RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 ABHD18Q0P651 414 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 TMEM35AQ53FP2 167 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 THEMIS2Q5TEJ8 643 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 IQCHQ86VS3 1027 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 CLHC1Q8NHS4 586 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 C16orf78Q8WTQ4 265 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 NAF1Q96HR8 494 aaKnown RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 PPM1MQ96MI6 270 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 PRPF18Q99633 342 aaKnown RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 REXO4Q9GZR2 422 aaKnown RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 OSGEPL1Q9H4B0 414 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 SPTY2D1-AS1A0A0U1RR47 76 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 GABRR3A8MPY1 467 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 H0Y8X5 98 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 BAG2O95816 211 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 FURINP09958 794 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 GPX2P18283 190 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 BSGP35613 385 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 TFF2Q03403 129 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 EIF2B5Q13144 721 aaKnown RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 ERMP1Q7Z2K6 904 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 ZNF740Q8NDX6 193 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 BIRC7Q96CA5 298 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 PKP2Q99959 881 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 EBPLQ9BY08 206 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 C8orf4Q9NR00 106 aa16.5■□□□□ 0.23
VPS13B-201ENST00000355155 IMP3Q9NV31 184 aaKnown RBP16.5■□□□□ 0.23
VPS13B-201ENST00000355155 NUMA1Q14980 2115 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 MYO10Q9HD67 2058 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 C1orf226A1L170 272 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 OR5K4A6NMS3 321 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 CD72P21854 359 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 PPIBP23284 216 aaKnown RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 POLE2P56282 527 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 TSTD1Q8NFU3 115 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 OR2L3Q8NG85 312 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 QRFPRQ96P65 431 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 DUSP26Q9BV47 211 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 SLC6A20Q9NP91 592 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 PCDHGA2Q9Y5H1 932 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 C5orf42Q9H799 3197 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 SCELO95171 688 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 PIM1P11309 404 aaPredicted RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 TPP2P29144 1249 aaPredicted RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 TSFMP43897 325 aaKnown RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 RPS9P46781 194 aaKnown RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 SESN3P58005 492 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 OR4D2P58180 307 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 UBE2IP63279 158 aaKnown RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 MAP7Q14244 749 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 HIPK4Q8NE63 616 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 OR13H1Q8NG92 308 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 CHST8Q9H2A9 424 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 DDX31Q9H8H2 851 aaKnown RBP16.49■□□□□ 0.23
VPS13B-201ENST00000355155 SLC6A13Q9NSD5 602 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 CA5BQ9Y2D0 317 aa16.49■□□□□ 0.23
VPS13B-201ENST00000355155 DHRS12A0PJE2 317 aa16.48■□□□□ 0.23
VPS13B-201ENST00000355155 RASGRP1O95267 797 aa16.48■□□□□ 0.23
VPS13B-201ENST00000355155 EML2O95834 649 aa16.48■□□□□ 0.23
VPS13B-201ENST00000355155 RETP07949 1114 aa16.48■□□□□ 0.23
VPS13B-201ENST00000355155 FCGR1AP12314 374 aa16.48■□□□□ 0.23
VPS13B-201ENST00000355155 FRKP42685 505 aaPredicted RBP16.48■□□□□ 0.23
VPS13B-201ENST00000355155 CLCN2P51788 898 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms