RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SNTA1Q13424 505 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ASAH1Q13510 395 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ARHGEF7Q14155 803 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 GALEQ14376 348 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 GARNL3Q5VVW2 1013 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PTRHD1Q6GMV3 140 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 TCTE3Q8IZS6 198 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 LRRC17Q8N6Y2 441 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 C9orf43Q8TAL5 461 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 DNAJA4Q8WW22 397 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PIH1D2Q8WWB5 315 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SELENOMQ8WWX9 145 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 RIT1Q92963 219 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 C1GALT1C1Q96EU7 318 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PGAP3Q96FM1 320 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 WACQ9BTA9 647 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 EBPLQ9BY08 206 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 RACGAP1Q9H0H5 632 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 NIPAL2Q9H841 368 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 C11orf16Q9NQ32 467 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 RLIMQ9NVW2 624 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 HACL1Q9UJ83 578 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 KLHL21Q9UJP4 597 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ADAMTS5Q9UNA0 930 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 H3BRB1 525 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 FZD9O00144 591 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 FFAR2O15552 330 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 IRAK2O43187 625 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SLC22A5O76082 557 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CCNB2O95067 398 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 FGF1P05230 155 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 GLULP15104 373 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 HOXB6P17509 224 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ALAS2P22557 587 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CPN2P22792 545 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CAV3P56539 151 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ZXDBP98169 803 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 BTN1A1Q13410 526 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PPIGQ13427 754 aaKnown RBP eCLIP7.38□□□□□ -1.231e-6■■■□□ 19.2
BRCA1-201ENST00000352993 KIAA0040Q15053 153 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 IQCCQ4KMZ1 466 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 C22orf42Q6IC83 251 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 KIAA1841Q6NSI8 718 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ABI3BPQ7Z7G0 1075 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 RDH10Q8IZV5 341 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 Q8N402 240 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 OR9Q2Q8NGE9 314 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 HASPINQ8TF76 798 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 APOLD1Q96LR9 279 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 MAGEB10Q96LZ2 347 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 QRFPRQ96P65 431 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 GDF15Q99988 308 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PGAP2Q9UHJ9 254 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 MGAT4AQ9UM21 535 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 HS3ST4Q9Y661 456 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PRAMEF33A0A0G2JMD5 474 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 C2orf81A6NN90 581 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ISM1B1AKI9 464 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 LOC730098B7Z3J9 87 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 INMT-MINDY4F8WBC2 141 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 FABP7O15540 132 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 PRAMEF10O60809 474 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ALPPP05187 535 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MC4RP32245 332 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SOX9P48436 509 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MRPL19P49406 292 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SUOXP51687 545 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 IHHQ14623 411 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 LARS2Q15031 903 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 TYW3Q6IPR3 259 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 AFTPHQ6ULP2 937 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 LUZP2Q86TE4 346 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MAL2Q969L2 176 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MYLPFQ96A32 169 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 HYLS1Q96M11 299 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 PITX2Q99697 317 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 POLR1EQ9GZS1 481 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MED28Q9H204 178 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 CLMPQ9H6B4 373 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 NUDT4Q9NZJ9 180 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 DNAJC27Q9NZQ0 273 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 CLEC2DQ9UHP7 191 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 TMCC3Q9ULS5 477 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 NDRG2Q9UN36 371 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SLC6A14Q9UN76 642 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 DLGAP4Q9Y2H0 992 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 GPR39O43194 453 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ATXN1LP0C7T5 689 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 HLA-DPA1P20036 260 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 HLA-DMAP28067 261 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MAGEA2P43356 314 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 KIR3DL1P43629 444 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SRP54P61011 504 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 DDX39BQ13838 428 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 C1DQ13901 141 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 GANABQ14697 944 aaKnown RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ANGPT1Q15389 498 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms