RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZNF282Q9UDV7 671 aaPredicted RBP21.32■■□□□ 1
UPF3A-201ENST00000351487 WARS2Q9UGM6 360 aaKnown RBP21.32■■□□□ 1
UPF3A-201ENST00000351487 ATP6V1HQ9UI12 483 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 ITM2BQ9Y287 266 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 MGAT4DA6NG13 374 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 SOD1P00441 154 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 NUDT7P0C024 238 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 EFNA1P20827 205 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 PBLDP30039 288 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 TBPL1P62380 186 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 SLC35A2P78381 396 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 KCNJ10P78508 379 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 SIM2Q14190 667 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 PDE12Q6L8Q7 609 aaKnown RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 TTC29Q8NA56 475 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 FAR1Q8WVX9 515 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 THUMPD1Q9NXG2 353 aaKnown RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 VPS4AQ9UN37 437 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 EXO1Q9UQ84 846 aaKnown RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 TPRKBQ9Y3C4 175 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 ZNF99A8MXY4 864 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 E9PQ18 207 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 SLC9A3R1O14745 358 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 PCDH7O60245 1069 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 INMTO95050 263 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 CISD3P0C7P0 127 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 CYP4B1P13584 511 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 EMX1Q04741 257 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 TEAD4Q15561 434 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 Q6ZNX1 250 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 GOT1L1Q8NHS2 421 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.31■■□□□ 1
UPF3A-201ENST00000351487 ZSWIM3Q96MP5 696 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 EPYCQ99645 322 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 PITX2Q99697 317 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 BCL7BQ9BQE9 202 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 BHLHE41Q9C0J9 482 aaPredicted RBP21.31■■□□□ 1
UPF3A-201ENST00000351487 RAD21L1Q9H4I0 556 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 PALMDQ9NP74 551 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 GMPPBQ9Y5P6 360 aa21.31■■□□□ 1
UPF3A-201ENST00000351487 FOXE1O00358 373 aaPredicted RBP21.3■■□□□ 1
UPF3A-201ENST00000351487 KIAA0355O15063 1070 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 SPINT1O43278 529 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 PFDN1O60925 122 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 LILRB5O75023 590 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 NDUFS2O75306 463 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 CLPXO76031 633 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 C9P02748 559 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 ACVR2AP27037 513 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 TMED1Q13445 227 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 AQP6Q13520 282 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 CRTC3Q6UUV7 619 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 TSPYL5Q86VY4 417 aaPredicted RBP21.3■■□□□ 1
UPF3A-201ENST00000351487 GPR156Q8NFN8 814 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 VN1R2Q8NFZ6 395 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 WFIKKN2Q8TEU8 576 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 SGPP1Q9BX95 441 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 KRT84Q9NSB2 600 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 ADPRHL2Q9NX46 363 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 PADI2Q9Y2J8 665 aa21.3■■□□□ 1
UPF3A-201ENST00000351487 GNG14A0A1W2PPG7 69 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 WEE1P30291 646 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 DGKGP49619 791 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 CCR3P51677 355 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 BMXP51813 675 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 ZNF763Q0D2J5 394 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 DHCR24Q15392 516 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 ANKDD1AQ495B1 522 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 KIAA1614Q5VZ46 1190 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 LAS2Q8IYD9 372 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 ZNF366Q8N895 744 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 C11orf65Q8NCR3 313 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 MIPOL1Q8TD10 442 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 EFCAB11Q9BUY7 163 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 ZCCHC2Q9C0B9 1178 aaKnown RBP21.29■■□□□ 1
UPF3A-201ENST00000351487 CCDC90BQ9GZT6 254 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 KIF17Q9P2E2 1029 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 PCDH10Q9P2E7 1040 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 TMEM229AB2RXF0 380 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 SUV39H1O43463 412 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 MRPS14O60783 128 aaKnown RBP21.29■■□□□ 1
UPF3A-201ENST00000351487 BCAS1O75363 584 aaPredicted RBP21.29■■□□□ 1
UPF3A-201ENST00000351487 SH3BGRLO75368 114 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 NPPBP16860 134 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 FMO3P31513 532 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 NTHL1P78549 312 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 CTF1Q16619 201 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 ZNF385BQ569K4 471 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 LAIR1Q6GTX8 287 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 SYTL1Q8IYJ3 562 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 OR4A15Q8NGL6 344 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 TPD52L3Q96J77 140 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 SAMD11Q96NU1 681 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 WRAP53Q9BUR4 548 aaKnown RBP21.29■■□□□ 1
UPF3A-201ENST00000351487 EHD1Q9H4M9 534 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 REEP4Q9H6H4 257 aa21.29■■□□□ 1
UPF3A-201ENST00000351487 ZNF197O14709 1029 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 ZNF8P17098 575 aaPredicted RBP21.28■■□□□ 1
UPF3A-201ENST00000351487 MVDP53602 400 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 IL1RL1Q01638 556 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms