RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ELOVL7A1L3X0 281 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 PRSS38A1L453 326 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3FA6NER0 549 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 PRR23AA6NEV1 266 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3LB9A6J9 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 H3BQ06 376 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 RNASET2O00584 256 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 DLGAP1O14490 977 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 RFXANKO14593 260 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 FPGTO14772 594 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TNFRSF10CO14798 259 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ACOX3O15254 700 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SLC31A1O15431 190 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 MBTPS2O43462 519 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 LATO43561 262 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 PCDH7O60245 1069 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBX19O60806 448 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SMNDC1O75940 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 APBB3O95704 486 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TGFB1P01137 390 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 LYNP07948 512 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 RETP07949 1114 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ABCB1P08183 1280 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3HP0C7X1 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 COX7A2P14406 83 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 HOXB6P17509 224 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 GABRG2P18507 467 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 NDUFV2P19404 249 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CXCR2P25025 360 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 PTX3P26022 381 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 RAB28P51157 221 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CCR8P51685 355 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CSNK1G2P78368 415 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 PHEXP78562 749 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF763Q0D2J5 394 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 LRRC74AQ0VAA2 488 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 MED21Q13503 144 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 MAP7Q14244 749 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 NFATC4Q14934 902 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 RPE65Q16518 533 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 DEPDC1Q5TB30 811 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ANXA8L1Q5VT79 327 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CPZQ66K79 652 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3GQ6DHY5 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3CQ6IPX1 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 DUS1LQ6P1R4 473 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 UGT2A3Q6UWM9 527 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ABRAXAS1Q6UWZ7 409 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TMIGD1Q6UXZ0 262 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 DNAJC14Q6Y2X3 702 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 IKBIPQ70UQ0 350 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 FKBP9P1Q75LS8 142 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SERPINA11Q86U17 422 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SLC9B2Q86UD5 537 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ANKRD46Q86W74 232 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 EPHX4Q8IUS5 362 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3Q8IZP1 549 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 GOT1L1Q8NHS2 421 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 WDR48Q8TAF3 677 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 C16orf78Q8WTQ4 265 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 OR1E3Q8WZA6 343 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 GFM2Q969S9 779 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 EME1Q96AY2 570 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 MTERF3Q96E29 417 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 AURKBQ96GD4 344 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 BMFQ96LC9 184 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 C12orf66Q96MD2 445 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 OR2M4Q96R27 311 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 FERD3LQ96RJ6 166 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 NRTNQ99748 197 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 AIF1LQ9BQI0 150 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 THUMPD3Q9BV44 507 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 DUSP26Q9BV47 211 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SARGQ9BW04 601 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CHID1Q9BWS9 393 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 RAB11FIP5Q9BXF6 653 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 MS4A8Q9BY19 250 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF717Q9BY31 904 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 BHLHE41Q9C0J9 482 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SEMA6AQ9H2E6 1030 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 VCXQ9H320 206 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 OR51B5Q9H339 312 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 Q9H521 79 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 REEP4Q9H6H4 257 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CARS2Q9HA77 564 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 FZD3Q9NPG1 666 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 SLC2A4RGQ9NR83 387 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CUEDC1Q9NWM3 386 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 USP36Q9P275 1121 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 LIMD1Q9UGP4 676 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TAC3Q9UHF0 121 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 PCOLCE2Q9UKZ9 415 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 AURKCQ9UQB9 309 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 KCNK6Q9Y257 313 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 INVSQ9Y283 1065 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 WBP11Q9Y2W2 641 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TDRKHQ9Y2W6 561 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 CFAP20Q9Y6A4 193 aaKnown RBP6.64□□□□□ -1.35
TRIM55-203ENST00000350034 AP4B1Q9Y6B7 739 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms