RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GPR155Q7Z3F1 870 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 COMMD6Q7Z4G1 85 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 STK32CQ86UX6 486 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ZZZ3Q8IYH5 903 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 METTL4Q8N3J2 472 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ZCCHC7Q8N3Z6 543 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 DGCR14Q96DF8 476 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 PCBD2Q9H0N5 130 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 WDR26Q9H7D7 661 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ATAD3AQ9NVI7 634 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TRPM6Q9BX84 2022 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 EME2A4GXA9 379 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 G3V2T6 193 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 CXCR2P25025 360 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TIE1P35590 1138 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 RPS21P63220 83 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 DMPKQ09013 629 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 SLC14A1Q13336 389 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 OTUD3Q5T2D3 398 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TMIGD1Q6UXZ0 262 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 LPCAT2Q7L5N7 544 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 PATL1Q86TB9 770 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 C17orf64Q86WR6 236 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 FAM129CQ86XR2 697 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 CACUL1Q86Y37 369 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TRIML2Q8N7C3 387 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TP53I13Q8NBR0 393 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 OR5K1Q8NHB7 308 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 RPP25Q9BUL9 199 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 C1QTNF2Q9BXJ5 285 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 YTHDF1Q9BYJ9 559 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TRIT1Q9H3H1 467 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TPT1P8Q9HAU6 139 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 SH3BP4Q9P0V3 963 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 RPS6KA6Q9UK32 745 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 PLAGL1Q9UM63 463 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 VPS4AQ9UN37 437 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ZFR2Q9UPR6 939 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 MYO9BQ13459 2157 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 K7EQS6 105 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 SNAP29O95721 258 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 ALPLP05186 524 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 GNAO1P09471 354 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 SLC35G4P0C7Q5 338 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 VAC14Q08AM6 782 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 EPS8Q12929 822 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 SGCGQ13326 291 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 ADAM15Q13444 863 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 VEZF1Q14119 521 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 NADK2Q4G0N4 442 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 ABRAXAS1Q6UWZ7 409 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 USP51Q70EK9 711 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 CLEC4FQ8N1N0 589 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 METTL25Q8N6Q8 603 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 C16orf78Q8WTQ4 265 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 SMPDL3AQ92484 453 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 MTERF3Q96E29 417 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 RIPOR3Q96MK2 946 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 GRIP2Q9C0E4 1043 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 SPNS1Q9H2V7 528 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 OR51B5Q9H339 312 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 RMI1Q9H9A7 625 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 TUBA8Q9NY65 449 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-201ENST00000350028 USE1Q9NZ43 259 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 AHSPQ9NZD4 102 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 SERGEFQ9UGK8 458 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 EXO1Q9UQ84 846 aaKnown RBP16.04■□□□□ 0.16
SAMM50-201ENST00000350028 ERVK-11Q9UQG0 969 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 AP1M2Q9Y6Q5 423 aa16.04■□□□□ 0.16
SAMM50-201ENST00000350028 C1orf226A1L170 272 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 AHCYL1O43865 530 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 KCNJ13O60928 360 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 PAK4O96013 591 aaPredicted RBP16.03■□□□□ 0.16
SAMM50-201ENST00000350028 FESP07332 822 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 ABCB1P08183 1280 aaPredicted RBP16.03■□□□□ 0.16
SAMM50-201ENST00000350028 THRBP10828 461 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 NELFEP18615 380 aaKnown RBP16.03■□□□□ 0.16
SAMM50-201ENST00000350028 KDELR2P33947 212 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 SOX9P48436 509 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 MEF2AQ02078 507 aaPredicted RBP16.03■□□□□ 0.16
SAMM50-201ENST00000350028 PDE7AQ13946 482 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 FGL2Q14314 439 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 RBBP5Q15291 538 aaKnown RBP16.03■□□□□ 0.16
SAMM50-201ENST00000350028 SDE2Q6IQ49 451 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 KIAA1161Q6NSJ0 714 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 PTOV1Q86YD1 416 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 RAB42Q8N4Z0 105 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 GOT1L1Q8NHS2 421 aaPredicted RBP16.03■□□□□ 0.16
SAMM50-201ENST00000350028 WDR48Q8TAF3 677 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 ZFP90Q8TF47 636 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 NCSTNQ92542 709 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 AIF1LQ9BQI0 150 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 RHBGQ9H310 441 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 NT5DC2Q9H857 520 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 FBRSQ9HAH7 460 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms