RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ZNF480Q8WV37 535 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SH3YL1Q96HL8 342 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HHIPL1Q96JK4 782 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NODALQ96S42 347 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RBM4BQ9BQ04 359 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NEURL2Q9BR09 285 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RBM4Q9BWF3 364 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ASPSCR1Q9BZE9 553 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 OR51B5Q9H339 312 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TRIT1Q9H3H1 467 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 GPN2Q9H9Y4 310 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TPT1P8Q9HAU6 139 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PLGRKTQ9HBL7 147 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ENPP5Q9UJA9 477 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PSME2Q9UL46 239 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NDRG4Q9ULP0 352 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 FZD4Q9ULV1 537 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 C16orf96A6NNT2 1141 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PRSS47A8MTI9 375 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PFDN6O15212 129 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 LRRTM2O43300 516 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 HPRP00739 348 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 URODP06132 367 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 MAP4P27816 1152 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 KIR3DL1P43629 444 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SLC6A11P48066 632 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 GJA8P48165 433 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TMBIM6P55061 237 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 NUP107P57740 925 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SNRPD1P62314 119 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RPS26P62854 115 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ITGADQ13349 1161 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SYT16Q17RD7 645 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF829Q3KNS6 432 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 GGTA1PQ4G0N0 100 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RBM48Q5RL73 367 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 OR2T5Q6IEZ7 315 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CAPN13Q6MZZ7 669 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CCDC81Q6ZN84 652 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CBLL1Q75N03 491 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 FAM20CQ8IXL6 584 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 LRRC56Q8IYG6 542 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 OR9Q2Q8NGE9 314 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 OR2T29Q8NH02 315 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 NELL1Q92832 810 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CPEB1Q9BZB8 566 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RNF208Q9H0X6 261 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 MIR1-1HGQ9H1L0 117 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 DUSP21Q9H596 190 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SLAMF7Q9NQ25 335 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM45AQ9NWC5 275 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 NDUFAF4Q9P032 175 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 VPS29Q9UBQ0 182 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 BAG5Q9UL15 447 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 HCN2Q9UL51 889 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 OGDHLQ9ULD0 1010 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RNF6Q9Y252 685 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CFAP20Q9Y6A4 193 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PRAMEF33A0A0G2JMD5 474 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SLC5A10A0PJK1 596 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 DYTNA2CJ06 578 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RTCAO00442 366 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PCDH17O14917 1159 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 HOXA2O43364 376 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 LATS1O95835 1130 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ANGPTL1O95841 491 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 KRT6AP02538 564 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 STATHP02808 62 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 KRT6BP04259 564 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PABPC1P11940 636 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 BMP4P12644 408 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 COX7A2P14406 83 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 KRT6CP48668 564 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TRPC1P48995 793 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RAD23AP54725 363 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RPP38P78345 283 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 IRF8Q02556 426 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 KCNC4Q03721 635 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ABHD18Q0P651 414 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RGNQ15493 299 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 MAPK11Q15759 364 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PRR23BQ6ZRT6 265 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PARS2Q7L3T8 475 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 BCDIN3DQ7Z5W3 292 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SERPINA11Q86U17 422 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PLA2G15Q8NCC3 412 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CHTF18Q8WVB6 975 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TAMM41Q96BW9 452 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CEP295NLQ96MC4 621 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF300Q96RE9 604 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ZBTB18Q99592 522 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SLC29A3Q9BZD2 475 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 FAM83DQ9H4H8 585 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SGK2Q9HBY8 427 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ZBTB20Q9HC78 741 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RAD18Q9NS91 495 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SACM1LQ9NTJ5 587 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 DNAJC11Q9NVH1 559 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SPG21Q9NZD8 308 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 WARS2Q9UGM6 360 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms