RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ZBTB11O95625 1053 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 CHEK2O96017 543 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 EZRP15311 586 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 GRK3P35626 688 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 PDX1P52945 283 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SNRPNP63162 240 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 TRIP6Q15654 476 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 RNF165Q6ZSG1 346 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 TRIM46Q7Z4K8 759 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SPATA21Q7Z572 469 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 ARHGAP22Q7Z5H3 698 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 RCBTB1Q8NDN9 531 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SLC41A2Q96JW4 573 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 ZFYVE21Q9BQ24 234 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 NSRP1Q9H0G5 558 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 AP1M2Q9Y6Q5 423 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SERTM1A2A2V5 107 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 H0YGG7 62 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 DIAPH2O60879 1101 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 RFPL3O75679 317 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 FAM107AO95990 144 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 TGFB1P01137 390 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 EPHA3P29320 983 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 ARF3P61204 181 aaPredicted RBP18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 RPS15AP62244 130 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 RELAQ04206 551 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 HYAL2Q12891 473 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 TUBB3Q13509 450 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 SPIDRQ14159 915 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 NAA25Q14CX7 972 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 GLRX5Q86SX6 157 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 SLCO6A1Q86UG4 719 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 MCATQ8IVS2 390 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 KIRREL3Q8IZU9 778 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 CARFQ8N187 725 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 CHCHD4Q8N4Q1 142 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 REPS1Q96D71 796 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 TCTN2Q96GX1 697 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 MAELQ96JY0 434 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 MS4A8Q9BY19 250 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 OR51B5Q9H339 312 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 ZNF768Q9H5H4 540 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 SOHLH2Q9NX45 425 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 PSD3Q9NYI0 1048 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 ZFP69BQ9UJL9 534 aa18.16■□□□□ 0.5
CHMP4A-201ENST00000347519 SPEGQ15772 3267 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 SPAARA0A1B0GVQ0 90 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 ANKDD1BA6NHY2 528 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 FOXE1O00358 373 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 SERPIND1P05546 499 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 AHRP35869 848 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 PIK3CBP42338 1070 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 MLLT3P42568 568 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 ID4P47928 161 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 INSM1Q01101 510 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 ZFP36L1Q07352 338 aaKnown RBP18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 CLPPQ16740 277 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 D2HGDHQ8N465 521 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 CCT6BQ92526 530 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 TM4SF19Q96DZ7 209 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 DPYSL5Q9BPU6 564 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 CHRNA10Q9GZZ6 450 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 KLHL31Q9H511 634 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 AKTIPQ9H8T0 292 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 PDE7BQ9NP56 450 aa18.15■□□□□ 0.5
CHMP4A-201ENST00000347519 TRPC5OSA6NMA1 111 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 C4orf51C9J302 202 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 SLC28A1O00337 649 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 SAP18O00422 153 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 CLEC3AO75596 197 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 ANKRD34CP0C6C1 535 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 FOLR1P15328 257 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 NELFEP18615 380 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 HNRNPH1P31943 449 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 ARFIP2P53365 341 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 VSX2P58304 361 aaPredicted RBP18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 HSD11B2P80365 405 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 CSTF3Q12996 717 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 ILKQ13418 452 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 GPR19Q15760 415 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 PHF19Q5T6S3 580 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 LARP4Q71RC2 724 aaKnown RBP eCLIP18.14■□□□□ 0.493e-10■■□□□ 13.2
CHMP4A-201ENST00000347519 ERMP1Q7Z2K6 904 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 ASPGQ86U10 573 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 NETO1Q8TDF5 533 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 F2RL3Q96RI0 385 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 STARD5Q9NSY2 213 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 SLC12A4Q9UP95 1085 aa18.14■□□□□ 0.49
CHMP4A-201ENST00000347519 SPTBP11277 2137 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 LSM1O15116 133 aaKnown RBP18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 TOX3O15405 576 aaPredicted RBP18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 NDUFS4O43181 175 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 PEX11AO75192 247 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 PRR35P0CG20 571 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 ZNF33BQ06732 778 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 C16orf72Q14CZ0 275 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 HKDC1Q2TB90 917 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 LSM12Q3MHD2 195 aaKnown RBP18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 DHRS13Q6UX07 377 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 KMT5CQ86Y97 462 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms