RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 EXT2Q93063 718 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 UBXN10Q96LJ8 280 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 OR4K3Q96R72 315 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 SARGQ9BW04 601 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 DNAJC11Q9NVH1 559 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 ZFP69BQ9UJL9 534 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 IKZF3Q9UKT9 509 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 SH2B3Q9UQQ2 575 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 SLC22A7Q9Y694 548 aa14.98□□□□□ -0.01
TSPAN4-201ENST00000346501 MDC1Q14676 2089 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 IGLV3-12A0A075B6K2 115 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 A0A087WUV0 522 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 SUPT3HB4E1H0 165 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 LCMT2O60294 686 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 SUPT3HO75486 399 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 C1QAP02745 245 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 STATHP02808 62 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 UQCRHP07919 91 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 C1GALT1C1LP0DN25 315 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 PLA2G2AP14555 144 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 IL10P22301 178 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 ITGA3P26006 1051 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 CNTFP26441 200 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 GSTM2P28161 218 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 MSH2P43246 934 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 AP2B1P63010 937 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 MEF2AQ02078 507 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 CDC16Q13042 620 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■■■□□ 18.4
TSPAN4-201ENST00000346501 HIST2H2ACQ16777 129 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 VWA2Q5GFL6 755 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 VWA5B1Q5TIE3 1220 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 HIST2H2AA3Q6FI13 130 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 TMEM214Q6NUQ4 689 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 VN1R4Q7Z5H5 301 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 GALNT16Q8N428 558 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 OR9A4Q8NGU2 314 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 TM4SF19Q96DZ7 209 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 TGIF2Q9GZN2 237 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 PITHD1Q9GZP4 211 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 ALG9Q9H6U8 611 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 NUDT4Q9NZJ9 180 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 C5AR2Q9P296 337 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 FBXL4Q9UKA2 621 aa14.97□□□□□ -0.01
TSPAN4-201ENST00000346501 FER1L5A0AVI2 2057 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 A0A088AWK7 358 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 ANKDD1BA6NHY2 528 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 IDSB3KWA1 339 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 FOXS1O43638 330 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 CCNT2O60583 730 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 CEACAM4O75871 244 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 WISP3O95389 354 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 MED26O95402 600 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 CYC1P08574 325 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 RHOXF2BP0C7M4 288 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 SLC35E2BP0CK96 405 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 IL1RNP18510 177 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 ZNF10P21506 573 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 GGT5P36269 586 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 CASRP41180 1078 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 GDF5P43026 501 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 SCTRP47872 440 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 STXBP1P61764 594 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 REEP5Q00765 189 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 MYBPC3Q14896 1274 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 PAGE2BQ5JRK9 111 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 KLHDC8AQ8IYD2 350 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 DTWD1Q8N5C7 304 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 KCT2Q8NC54 265 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 FDCSPQ8NFU4 85 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 RHOXF2Q9BQY4 288 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 SNX15Q9NRS6 342 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 C19orf25Q9UFG5 118 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 MKL2Q9ULH7 1088 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 NFU1Q9UMS0 254 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 ANGPTL3Q9Y5C1 460 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 HS3ST3B1Q9Y662 390 aa14.96□□□□□ -0.01
TSPAN4-201ENST00000346501 A0A096LPK6 155 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 NSG1A0A0A6YYJ2 146 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 POC1B-GALNT4F8VUJ3 575 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 KERAO60938 352 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 HPP00738 406 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 C2P06681 752 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 ALOX12P18054 663 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 NR1D1P20393 614 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 SLC6A12P48065 614 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 HSPA7P48741 367 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 LAPTM5Q13571 262 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 BMPR2Q13873 1038 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 ACAP2Q15057 778 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 OR4D1Q15615 310 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 PDK4Q16654 411 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 ZXDCQ2QGD7 858 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 MINDY4Q4G0A6 757 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 ATG9BQ674R7 924 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 TMIGD1Q6UXZ0 262 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 TRMT10CQ7L0Y3 403 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 LRRC70Q7Z2Q7 622 aa14.95□□□□□ -0.02
TSPAN4-201ENST00000346501 AMER3Q8N944 861 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms